Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RPAP1Q9BWH6 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RPAP1Q9BWH6 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC18.36■□□□□ 0.53
RPAP1Q9BWH6 AL008638.5-201ENST00000623814 1298 ntBASIC18.36■□□□□ 0.53
RPAP1Q9BWH6 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC18.36■□□□□ 0.53
RPAP1Q9BWH6 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RPAP1Q9BWH6 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RPAP1Q9BWH6 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RPAP1Q9BWH6 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
RPAP1Q9BWH6 REXO1L2P-201ENST00000425429 2069 ntBASIC18.36■□□□□ 0.53
RPAP1Q9BWH6 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RPAP1Q9BWH6 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC18.36■□□□□ 0.53
RPAP1Q9BWH6 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RPAP1Q9BWH6 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RPAP1Q9BWH6 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC18.36■□□□□ 0.53
RPAP1Q9BWH6 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC18.35■□□□□ 0.53
RPAP1Q9BWH6 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPAP1Q9BWH6 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
RPAP1Q9BWH6 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC18.35■□□□□ 0.53
RPAP1Q9BWH6 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RPAP1Q9BWH6 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
RPAP1Q9BWH6 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPAP1Q9BWH6 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPAP1Q9BWH6 F11R-206ENST00000621309 4770 ntTSL 5 BASIC18.35■□□□□ 0.53
RPAP1Q9BWH6 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPAP1Q9BWH6 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC18.35■□□□□ 0.53
RPAP1Q9BWH6 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPAP1Q9BWH6 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC18.35■□□□□ 0.53
RPAP1Q9BWH6 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPAP1Q9BWH6 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPAP1Q9BWH6 AGER-203ENST00000375065 665 ntTSL 2 BASIC18.35■□□□□ 0.53
RPAP1Q9BWH6 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RPAP1Q9BWH6 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RPAP1Q9BWH6 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RPAP1Q9BWH6 KLF2P2-201ENST00000416807 1039 ntBASIC18.35■□□□□ 0.53
RPAP1Q9BWH6 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC18.35■□□□□ 0.53
RPAP1Q9BWH6 MTX1P1-201ENST00000440904 838 ntBASIC18.35■□□□□ 0.53
RPAP1Q9BWH6 AL591846.1-201ENST00000451736 433 ntBASIC18.35■□□□□ 0.53
RPAP1Q9BWH6 TPI1-206ENST00000488464 791 ntTSL 5 BASIC18.35■□□□□ 0.53
RPAP1Q9BWH6 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPAP1Q9BWH6 RN7SL48P-201ENST00000579283 293 ntBASIC18.35■□□□□ 0.53
RPAP1Q9BWH6 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC18.35■□□□□ 0.53
RPAP1Q9BWH6 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC18.35■□□□□ 0.53
RPAP1Q9BWH6 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
RPAP1Q9BWH6 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC18.35■□□□□ 0.53
RPAP1Q9BWH6 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC18.35■□□□□ 0.53
RPAP1Q9BWH6 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC18.35■□□□□ 0.53
RPAP1Q9BWH6 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPAP1Q9BWH6 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPAP1Q9BWH6 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
RPAP1Q9BWH6 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC18.35■□□□□ 0.53
RPAP1Q9BWH6 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RPAP1Q9BWH6 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPAP1Q9BWH6 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPAP1Q9BWH6 FGD5P1-202ENST00000614866 2498 ntBASIC18.35■□□□□ 0.53
RPAP1Q9BWH6 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPAP1Q9BWH6 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC18.35■□□□□ 0.53
RPAP1Q9BWH6 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPAP1Q9BWH6 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
RPAP1Q9BWH6 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPAP1Q9BWH6 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPAP1Q9BWH6 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
RPAP1Q9BWH6 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPAP1Q9BWH6 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RPAP1Q9BWH6 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RPAP1Q9BWH6 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
RPAP1Q9BWH6 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC18.34■□□□□ 0.53
RPAP1Q9BWH6 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
RPAP1Q9BWH6 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC18.34■□□□□ 0.53
RPAP1Q9BWH6 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPAP1Q9BWH6 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPAP1Q9BWH6 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPAP1Q9BWH6 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPAP1Q9BWH6 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPAP1Q9BWH6 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RPAP1Q9BWH6 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RPAP1Q9BWH6 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC18.34■□□□□ 0.53
RPAP1Q9BWH6 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
RPAP1Q9BWH6 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC18.34■□□□□ 0.53
RPAP1Q9BWH6 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RPAP1Q9BWH6 AC091804.1-201ENST00000486888 567 ntBASIC18.34■□□□□ 0.53
RPAP1Q9BWH6 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC18.34■□□□□ 0.53
RPAP1Q9BWH6 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPAP1Q9BWH6 AL118558.3-201ENST00000607414 1079 ntBASIC18.34■□□□□ 0.53
RPAP1Q9BWH6 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC18.34■□□□□ 0.53
RPAP1Q9BWH6 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPAP1Q9BWH6 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RPAP1Q9BWH6 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPAP1Q9BWH6 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPAP1Q9BWH6 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPAP1Q9BWH6 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPAP1Q9BWH6 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RPAP1Q9BWH6 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
RPAP1Q9BWH6 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPAP1Q9BWH6 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPAP1Q9BWH6 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
RPAP1Q9BWH6 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
RPAP1Q9BWH6 GRN-222ENST00000639447 1314 ntTSL 2 BASIC18.34■□□□□ 0.53
RPAP1Q9BWH6 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPAP1Q9BWH6 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms