Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC17.07■□□□□ 0.32
PTPN18Q99952 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC17.07■□□□□ 0.32
PTPN18Q99952 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC17.07■□□□□ 0.32
PTPN18Q99952 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
PTPN18Q99952 REXO1L2P-201ENST00000425429 2069 ntBASIC17.07■□□□□ 0.32
PTPN18Q99952 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN18Q99952 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN18Q99952 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN18Q99952 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN18Q99952 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
PTPN18Q99952 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC17.06■□□□□ 0.32
PTPN18Q99952 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
PTPN18Q99952 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
PTPN18Q99952 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
PTPN18Q99952 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN18Q99952 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.06■□□□□ 0.32
PTPN18Q99952 TMBIM7P-202ENST00000641474 1516 ntBASIC17.06■□□□□ 0.32
PTPN18Q99952 AC105250.1-201ENST00000509378 2057 ntBASIC17.06■□□□□ 0.32
PTPN18Q99952 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN18Q99952 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC17.06■□□□□ 0.32
PTPN18Q99952 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN18Q99952 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC17.06■□□□□ 0.32
PTPN18Q99952 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN18Q99952 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC17.06■□□□□ 0.32
PTPN18Q99952 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN18Q99952 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN18Q99952 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN18Q99952 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC17.06■□□□□ 0.32
PTPN18Q99952 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC17.06■□□□□ 0.32
PTPN18Q99952 MDH2-205ENST00000461263 648 ntTSL 2 BASIC17.06■□□□□ 0.32
PTPN18Q99952 AC114947.1-202ENST00000514136 344 ntBASIC17.06■□□□□ 0.32
PTPN18Q99952 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC17.06■□□□□ 0.32
PTPN18Q99952 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC17.06■□□□□ 0.32
PTPN18Q99952 CR383656.3-201ENST00000551315 183 ntBASIC17.06■□□□□ 0.32
PTPN18Q99952 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC17.06■□□□□ 0.32
PTPN18Q99952 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC17.06■□□□□ 0.32
PTPN18Q99952 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC17.06■□□□□ 0.32
PTPN18Q99952 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN18Q99952 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC17.06■□□□□ 0.32
PTPN18Q99952 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN18Q99952 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN18Q99952 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC17.06■□□□□ 0.32
PTPN18Q99952 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN18Q99952 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN18Q99952 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN18Q99952 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN18Q99952 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.06■□□□□ 0.32
PTPN18Q99952 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
PTPN18Q99952 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
PTPN18Q99952 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN18Q99952 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC17.05■□□□□ 0.32
PTPN18Q99952 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
PTPN18Q99952 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.05■□□□□ 0.32
PTPN18Q99952 FAS-202ENST00000352159 1722 ntTSL 5 BASIC17.05■□□□□ 0.32
PTPN18Q99952 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN18Q99952 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.05■□□□□ 0.32
PTPN18Q99952 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
PTPN18Q99952 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.05■□□□□ 0.32
PTPN18Q99952 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC17.05■□□□□ 0.32
PTPN18Q99952 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC17.05■□□□□ 0.32
PTPN18Q99952 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
PTPN18Q99952 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
PTPN18Q99952 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN18Q99952 TLE1P1-201ENST00000422965 589 ntBASIC17.05■□□□□ 0.32
PTPN18Q99952 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC17.05■□□□□ 0.32
PTPN18Q99952 AL354861.1-201ENST00000445213 355 ntBASIC17.05■□□□□ 0.32
PTPN18Q99952 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN18Q99952 AL035414.1-201ENST00000451327 857 ntBASIC17.05■□□□□ 0.32
PTPN18Q99952 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC17.05■□□□□ 0.32
PTPN18Q99952 NEU3-207ENST00000534628 746 ntTSL 2 BASIC17.05■□□□□ 0.32
PTPN18Q99952 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC17.05■□□□□ 0.32
PTPN18Q99952 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN18Q99952 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC17.05■□□□□ 0.32
PTPN18Q99952 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
PTPN18Q99952 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PTPN18Q99952 HLA-DQB1-202ENST00000399079 1501 ntBASIC17.05■□□□□ 0.32
PTPN18Q99952 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN18Q99952 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC17.05■□□□□ 0.32
PTPN18Q99952 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
PTPN18Q99952 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN18Q99952 PCDHB19P-201ENST00000570871 2371 ntBASIC17.04■□□□□ 0.32
PTPN18Q99952 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN18Q99952 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN18Q99952 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN18Q99952 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC17.04■□□□□ 0.32
PTPN18Q99952 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN18Q99952 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN18Q99952 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN18Q99952 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN18Q99952 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN18Q99952 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN18Q99952 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN18Q99952 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN18Q99952 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
PTPN18Q99952 HLA-DMA-203ENST00000395305 777 ntBASIC17.04■□□□□ 0.32
PTPN18Q99952 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC17.04■□□□□ 0.32
PTPN18Q99952 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN18Q99952 FAU-202ENST00000434372 533 ntTSL 2 BASIC17.04■□□□□ 0.32
PTPN18Q99952 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC17.04■□□□□ 0.32
PTPN18Q99952 RN7SL396P-201ENST00000471086 295 ntBASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms