Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RAB40CQ96S21 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RAB40CQ96S21 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RAB40CQ96S21 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RAB40CQ96S21 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RAB40CQ96S21 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
RAB40CQ96S21 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
RAB40CQ96S21 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RAB40CQ96S21 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC12.38□□□□□ -0.43
RAB40CQ96S21 MIR346-201ENST00000362234 95 ntBASIC12.38□□□□□ -0.43
RAB40CQ96S21 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
RAB40CQ96S21 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RAB40CQ96S21 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
RAB40CQ96S21 AL022342.1-201ENST00000400363 863 ntBASIC12.38□□□□□ -0.43
RAB40CQ96S21 TFAMP1-201ENST00000412727 736 ntBASIC12.38□□□□□ -0.43
RAB40CQ96S21 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC12.38□□□□□ -0.43
RAB40CQ96S21 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC12.38□□□□□ -0.43
RAB40CQ96S21 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RAB40CQ96S21 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC12.38□□□□□ -0.43
RAB40CQ96S21 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC12.38□□□□□ -0.43
RAB40CQ96S21 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC12.38□□□□□ -0.43
RAB40CQ96S21 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RAB40CQ96S21 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RAB40CQ96S21 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC12.38□□□□□ -0.43
RAB40CQ96S21 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
RAB40CQ96S21 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC12.38□□□□□ -0.43
RAB40CQ96S21 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC12.38□□□□□ -0.43
RAB40CQ96S21 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
RAB40CQ96S21 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC12.38□□□□□ -0.43
RAB40CQ96S21 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC12.38□□□□□ -0.43
RAB40CQ96S21 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC12.38□□□□□ -0.43
RAB40CQ96S21 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC12.38□□□□□ -0.43
RAB40CQ96S21 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
RAB40CQ96S21 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RAB40CQ96S21 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
RAB40CQ96S21 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
RAB40CQ96S21 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC12.38□□□□□ -0.43
RAB40CQ96S21 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC12.38□□□□□ -0.43
RAB40CQ96S21 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
RAB40CQ96S21 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
RAB40CQ96S21 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
RAB40CQ96S21 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
RAB40CQ96S21 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
RAB40CQ96S21 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RAB40CQ96S21 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
RAB40CQ96S21 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
RAB40CQ96S21 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC12.38□□□□□ -0.43
RAB40CQ96S21 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
RAB40CQ96S21 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC12.38□□□□□ -0.43
RAB40CQ96S21 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RAB40CQ96S21 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC12.38□□□□□ -0.43
RAB40CQ96S21 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC12.38□□□□□ -0.43
RAB40CQ96S21 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
RAB40CQ96S21 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
RAB40CQ96S21 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
RAB40CQ96S21 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC12.38□□□□□ -0.43
RAB40CQ96S21 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC12.38□□□□□ -0.43
RAB40CQ96S21 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RAB40CQ96S21 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC12.37□□□□□ -0.43
RAB40CQ96S21 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC12.37□□□□□ -0.43
RAB40CQ96S21 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RAB40CQ96S21 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
RAB40CQ96S21 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
RAB40CQ96S21 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
RAB40CQ96S21 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
RAB40CQ96S21 GRN-214ENST00000589265 1632 ntTSL 5 BASIC12.37□□□□□ -0.43
RAB40CQ96S21 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
RAB40CQ96S21 AC131212.3-201ENST00000624087 4219 ntBASIC12.37□□□□□ -0.43
RAB40CQ96S21 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RAB40CQ96S21 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RAB40CQ96S21 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
RAB40CQ96S21 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
RAB40CQ96S21 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC12.37□□□□□ -0.43
RAB40CQ96S21 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
RAB40CQ96S21 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
RAB40CQ96S21 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
RAB40CQ96S21 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
RAB40CQ96S21 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RAB40CQ96S21 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
RAB40CQ96S21 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RAB40CQ96S21 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RAB40CQ96S21 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RAB40CQ96S21 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
RAB40CQ96S21 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
RAB40CQ96S21 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
RAB40CQ96S21 AL671277.1-201ENST00000429656 993 ntBASIC12.37□□□□□ -0.43
RAB40CQ96S21 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC12.37□□□□□ -0.43
RAB40CQ96S21 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RAB40CQ96S21 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
RAB40CQ96S21 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RAB40CQ96S21 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC12.37□□□□□ -0.43
RAB40CQ96S21 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
RAB40CQ96S21 INO80E-210ENST00000567705 880 ntTSL 3 BASIC12.37□□□□□ -0.43
RAB40CQ96S21 AP000842.3-202ENST00000569238 1080 ntBASIC12.37□□□□□ -0.43
RAB40CQ96S21 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC12.37□□□□□ -0.43
RAB40CQ96S21 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC12.37□□□□□ -0.43
RAB40CQ96S21 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
RAB40CQ96S21 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
RAB40CQ96S21 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC12.37□□□□□ -0.43
RAB40CQ96S21 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms