Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.74■□□□□ 0.11
IFT43Q96FT9 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.74■□□□□ 0.11
IFT43Q96FT9 AL158212.4-201ENST00000624062 1286 ntBASIC15.74■□□□□ 0.11
IFT43Q96FT9 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
IFT43Q96FT9 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.74■□□□□ 0.11
IFT43Q96FT9 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
IFT43Q96FT9 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
IFT43Q96FT9 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
IFT43Q96FT9 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
IFT43Q96FT9 AC148477.4-201ENST00000613430 1793 ntBASIC15.74■□□□□ 0.11
IFT43Q96FT9 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
IFT43Q96FT9 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
IFT43Q96FT9 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
IFT43Q96FT9 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
IFT43Q96FT9 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.74■□□□□ 0.11
IFT43Q96FT9 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
IFT43Q96FT9 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
IFT43Q96FT9 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.74■□□□□ 0.11
IFT43Q96FT9 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.73■□□□□ 0.11
IFT43Q96FT9 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
IFT43Q96FT9 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
IFT43Q96FT9 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
IFT43Q96FT9 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.73■□□□□ 0.11
IFT43Q96FT9 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
IFT43Q96FT9 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
IFT43Q96FT9 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
IFT43Q96FT9 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
IFT43Q96FT9 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
IFT43Q96FT9 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.73■□□□□ 0.11
IFT43Q96FT9 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.73■□□□□ 0.11
IFT43Q96FT9 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
IFT43Q96FT9 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.73■□□□□ 0.11
IFT43Q96FT9 ELK1P1-201ENST00000485699 580 ntBASIC15.73■□□□□ 0.11
IFT43Q96FT9 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
IFT43Q96FT9 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.73■□□□□ 0.11
IFT43Q96FT9 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.73■□□□□ 0.11
IFT43Q96FT9 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.73■□□□□ 0.11
IFT43Q96FT9 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.73■□□□□ 0.11
IFT43Q96FT9 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
IFT43Q96FT9 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.73■□□□□ 0.11
IFT43Q96FT9 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
IFT43Q96FT9 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
IFT43Q96FT9 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
IFT43Q96FT9 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.73■□□□□ 0.11
IFT43Q96FT9 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.73■□□□□ 0.11
IFT43Q96FT9 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.73■□□□□ 0.11
IFT43Q96FT9 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.73■□□□□ 0.11
IFT43Q96FT9 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
IFT43Q96FT9 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
IFT43Q96FT9 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
IFT43Q96FT9 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
IFT43Q96FT9 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
IFT43Q96FT9 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
IFT43Q96FT9 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
IFT43Q96FT9 AL359183.1-201ENST00000623796 2132 ntBASIC15.73■□□□□ 0.11
IFT43Q96FT9 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.73■□□□□ 0.11
IFT43Q96FT9 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
IFT43Q96FT9 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.72■□□□□ 0.11
IFT43Q96FT9 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
IFT43Q96FT9 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.72■□□□□ 0.11
IFT43Q96FT9 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
IFT43Q96FT9 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
IFT43Q96FT9 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
IFT43Q96FT9 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
IFT43Q96FT9 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.72■□□□□ 0.11
IFT43Q96FT9 AL122018.1-201ENST00000446607 2310 ntBASIC15.72■□□□□ 0.11
IFT43Q96FT9 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
IFT43Q96FT9 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
IFT43Q96FT9 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
IFT43Q96FT9 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
IFT43Q96FT9 LINC01101-201ENST00000622953 1884 ntBASIC15.72■□□□□ 0.11
IFT43Q96FT9 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
IFT43Q96FT9 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.72■□□□□ 0.11
IFT43Q96FT9 CICP23-201ENST00000605013 2741 ntBASIC15.72■□□□□ 0.11
IFT43Q96FT9 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
IFT43Q96FT9 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
IFT43Q96FT9 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
IFT43Q96FT9 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.72■□□□□ 0.11
IFT43Q96FT9 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.72■□□□□ 0.11
IFT43Q96FT9 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.72■□□□□ 0.11
IFT43Q96FT9 AC104596.2-201ENST00000512793 793 ntBASIC15.72■□□□□ 0.11
IFT43Q96FT9 GLI4-203ENST00000517468 963 ntTSL 5 BASIC15.72■□□□□ 0.11
IFT43Q96FT9 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.72■□□□□ 0.11
IFT43Q96FT9 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.72■□□□□ 0.11
IFT43Q96FT9 AC036164.1-201ENST00000570544 333 ntBASIC15.72■□□□□ 0.11
IFT43Q96FT9 AC132938.2-201ENST00000579188 680 ntBASIC15.72■□□□□ 0.11
IFT43Q96FT9 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.72■□□□□ 0.11
IFT43Q96FT9 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.72■□□□□ 0.11
IFT43Q96FT9 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
IFT43Q96FT9 AL591163.1-201ENST00000641757 987 ntBASIC15.72■□□□□ 0.11
IFT43Q96FT9 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
IFT43Q96FT9 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
IFT43Q96FT9 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
IFT43Q96FT9 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
IFT43Q96FT9 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
IFT43Q96FT9 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
IFT43Q96FT9 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
IFT43Q96FT9 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC15.72■□□□□ 0.11
IFT43Q96FT9 AC126365.1-201ENST00000578585 1514 ntBASIC15.72■□□□□ 0.11
IFT43Q96FT9 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms