Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
CKAP2Q8WWK9 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CKAP2Q8WWK9 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CKAP2Q8WWK9 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CKAP2Q8WWK9 AL591122.2-201ENST00000624125 1853 ntBASIC15.12■□□□□ 0.01
CKAP2Q8WWK9 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC15.12■□□□□ 0.01
CKAP2Q8WWK9 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CKAP2Q8WWK9 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC15.12■□□□□ 0.01
CKAP2Q8WWK9 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CKAP2Q8WWK9 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CKAP2Q8WWK9 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC15.12■□□□□ 0.01
CKAP2Q8WWK9 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CKAP2Q8WWK9 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.12■□□□□ 0.01
CKAP2Q8WWK9 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC15.12■□□□□ 0.01
CKAP2Q8WWK9 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC15.12■□□□□ 0.01
CKAP2Q8WWK9 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
CKAP2Q8WWK9 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC15.12■□□□□ 0.01
CKAP2Q8WWK9 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CKAP2Q8WWK9 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CKAP2Q8WWK9 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
CKAP2Q8WWK9 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CKAP2Q8WWK9 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CKAP2Q8WWK9 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.12■□□□□ 0.01
CKAP2Q8WWK9 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CKAP2Q8WWK9 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
CKAP2Q8WWK9 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CKAP2Q8WWK9 AL355306.1-201ENST00000415580 579 ntBASIC15.12■□□□□ 0.01
CKAP2Q8WWK9 AC074338.1-201ENST00000416825 156 ntBASIC15.12■□□□□ 0.01
CKAP2Q8WWK9 AL671277.1-201ENST00000429656 993 ntBASIC15.12■□□□□ 0.01
CKAP2Q8WWK9 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.12■□□□□ 0.01
CKAP2Q8WWK9 KRT18P2-201ENST00000447938 1258 ntBASIC15.12■□□□□ 0.01
CKAP2Q8WWK9 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.12■□□□□ 0.01
CKAP2Q8WWK9 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.12■□□□□ 0.01
CKAP2Q8WWK9 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.12■□□□□ 0.01
CKAP2Q8WWK9 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CKAP2Q8WWK9 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.12■□□□□ 0.01
CKAP2Q8WWK9 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.12■□□□□ 0.01
CKAP2Q8WWK9 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CKAP2Q8WWK9 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
CKAP2Q8WWK9 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CKAP2Q8WWK9 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CKAP2Q8WWK9 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.12■□□□□ 0.01
CKAP2Q8WWK9 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CKAP2Q8WWK9 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CKAP2Q8WWK9 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
CKAP2Q8WWK9 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CKAP2Q8WWK9 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CKAP2Q8WWK9 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CKAP2Q8WWK9 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC15.12■□□□□ 0.01
CKAP2Q8WWK9 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CKAP2Q8WWK9 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CKAP2Q8WWK9 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CKAP2Q8WWK9 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
CKAP2Q8WWK9 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC15.12■□□□□ 0.01
CKAP2Q8WWK9 AC015909.5-201ENST00000624336 2266 ntBASIC15.12■□□□□ 0.01
CKAP2Q8WWK9 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CKAP2Q8WWK9 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CKAP2Q8WWK9 AC012617.1-204ENST00000586340 2305 ntBASIC15.11■□□□□ 0.01
CKAP2Q8WWK9 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CKAP2Q8WWK9 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CKAP2Q8WWK9 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CKAP2Q8WWK9 AC023794.5-201ENST00000564380 2157 ntBASIC15.11■□□□□ 0.01
CKAP2Q8WWK9 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CKAP2Q8WWK9 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CKAP2Q8WWK9 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.11■□□□□ 0.01
CKAP2Q8WWK9 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CKAP2Q8WWK9 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CKAP2Q8WWK9 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CKAP2Q8WWK9 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CKAP2Q8WWK9 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CKAP2Q8WWK9 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.11■□□□□ 0.01
CKAP2Q8WWK9 AL031284.1-201ENST00000419297 478 ntBASIC15.11■□□□□ 0.01
CKAP2Q8WWK9 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.11■□□□□ 0.01
CKAP2Q8WWK9 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.11■□□□□ 0.01
CKAP2Q8WWK9 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.11■□□□□ 0.01
CKAP2Q8WWK9 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CKAP2Q8WWK9 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.11■□□□□ 0.01
CKAP2Q8WWK9 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CKAP2Q8WWK9 SLED1-202ENST00000512051 380 ntBASIC15.11■□□□□ 0.01
CKAP2Q8WWK9 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CKAP2Q8WWK9 LINC01225-203ENST00000563550 1244 ntBASIC15.11■□□□□ 0.01
CKAP2Q8WWK9 SLC25A6P4-201ENST00000586535 553 ntBASIC15.11■□□□□ 0.01
CKAP2Q8WWK9 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
CKAP2Q8WWK9 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.11■□□□□ 0.01
CKAP2Q8WWK9 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CKAP2Q8WWK9 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CKAP2Q8WWK9 NUTM2HP-201ENST00000442076 2498 ntBASIC15.11■□□□□ 0.01
CKAP2Q8WWK9 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CKAP2Q8WWK9 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CKAP2Q8WWK9 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CKAP2Q8WWK9 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CKAP2Q8WWK9 TCAM1P-207ENST00000485295 1537 ntBASIC15.11■□□□□ 0.01
CKAP2Q8WWK9 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.11■□□□□ 0.01
CKAP2Q8WWK9 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CKAP2Q8WWK9 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CKAP2Q8WWK9 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CKAP2Q8WWK9 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CKAP2Q8WWK9 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CKAP2Q8WWK9 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CKAP2Q8WWK9 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms