Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM4Q8WVI0 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM4Q8WVI0 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM4Q8WVI0 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.01□□□□□ -0.33
SMIM4Q8WVI0 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.01□□□□□ -0.33
SMIM4Q8WVI0 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM4Q8WVI0 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM4Q8WVI0 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM4Q8WVI0 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
SMIM4Q8WVI0 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
SMIM4Q8WVI0 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM4Q8WVI0 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC13.01□□□□□ -0.33
SMIM4Q8WVI0 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM4Q8WVI0 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
SMIM4Q8WVI0 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM4Q8WVI0 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC13.01□□□□□ -0.33
SMIM4Q8WVI0 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM4Q8WVI0 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.01□□□□□ -0.33
SMIM4Q8WVI0 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.01□□□□□ -0.33
SMIM4Q8WVI0 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM4Q8WVI0 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
SMIM4Q8WVI0 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM4Q8WVI0 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
SMIM4Q8WVI0 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM4Q8WVI0 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13□□□□□ -0.33
SMIM4Q8WVI0 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM4Q8WVI0 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM4Q8WVI0 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13□□□□□ -0.33
SMIM4Q8WVI0 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM4Q8WVI0 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM4Q8WVI0 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
SMIM4Q8WVI0 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM4Q8WVI0 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC13□□□□□ -0.33
SMIM4Q8WVI0 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM4Q8WVI0 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM4Q8WVI0 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM4Q8WVI0 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM4Q8WVI0 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC13□□□□□ -0.33
SMIM4Q8WVI0 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
SMIM4Q8WVI0 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
SMIM4Q8WVI0 AC020910.6-201ENST00000623084 1459 ntBASIC13□□□□□ -0.33
SMIM4Q8WVI0 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC13□□□□□ -0.33
SMIM4Q8WVI0 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC13□□□□□ -0.33
SMIM4Q8WVI0 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM4Q8WVI0 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC13□□□□□ -0.33
SMIM4Q8WVI0 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC13□□□□□ -0.33
SMIM4Q8WVI0 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC13□□□□□ -0.33
SMIM4Q8WVI0 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC13□□□□□ -0.33
SMIM4Q8WVI0 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC13□□□□□ -0.33
SMIM4Q8WVI0 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM4Q8WVI0 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
SMIM4Q8WVI0 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13□□□□□ -0.33
SMIM4Q8WVI0 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13□□□□□ -0.33
SMIM4Q8WVI0 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC13□□□□□ -0.33
SMIM4Q8WVI0 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13□□□□□ -0.33
SMIM4Q8WVI0 AC092910.1-201ENST00000482027 1129 ntBASIC13□□□□□ -0.33
SMIM4Q8WVI0 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC13□□□□□ -0.33
SMIM4Q8WVI0 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC13□□□□□ -0.33
SMIM4Q8WVI0 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM4Q8WVI0 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC13□□□□□ -0.33
SMIM4Q8WVI0 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC13□□□□□ -0.33
SMIM4Q8WVI0 AC068137.2-201ENST00000605408 478 ntBASIC13□□□□□ -0.33
SMIM4Q8WVI0 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13□□□□□ -0.33
SMIM4Q8WVI0 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM4Q8WVI0 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM4Q8WVI0 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM4Q8WVI0 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM4Q8WVI0 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
SMIM4Q8WVI0 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13□□□□□ -0.33
SMIM4Q8WVI0 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13□□□□□ -0.33
SMIM4Q8WVI0 AC020658.7-201ENST00000624274 2442 ntBASIC13□□□□□ -0.33
SMIM4Q8WVI0 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM4Q8WVI0 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
SMIM4Q8WVI0 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13□□□□□ -0.33
SMIM4Q8WVI0 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13□□□□□ -0.33
SMIM4Q8WVI0 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
SMIM4Q8WVI0 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
SMIM4Q8WVI0 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SMIM4Q8WVI0 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SMIM4Q8WVI0 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SMIM4Q8WVI0 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SMIM4Q8WVI0 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
SMIM4Q8WVI0 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC12.99□□□□□ -0.33
SMIM4Q8WVI0 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SMIM4Q8WVI0 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC12.99□□□□□ -0.33
SMIM4Q8WVI0 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC12.99□□□□□ -0.33
SMIM4Q8WVI0 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC12.99□□□□□ -0.33
SMIM4Q8WVI0 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SMIM4Q8WVI0 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
SMIM4Q8WVI0 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SMIM4Q8WVI0 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC12.99□□□□□ -0.33
SMIM4Q8WVI0 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC12.99□□□□□ -0.33
SMIM4Q8WVI0 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
SMIM4Q8WVI0 BCAR1-209ENST00000546196 1340 ntBASIC12.99□□□□□ -0.33
SMIM4Q8WVI0 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC12.99□□□□□ -0.33
SMIM4Q8WVI0 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SMIM4Q8WVI0 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC12.99□□□□□ -0.33
SMIM4Q8WVI0 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
SMIM4Q8WVI0 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC12.99□□□□□ -0.33
SMIM4Q8WVI0 AL133267.1-201ENST00000398220 340 ntBASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms