Protein–RNA interactions for Protein: Q8WUY3

PRUNE2, Protein prune homolog 2, humanhuman

Predictions only

Length 3,088 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2Q8WUY3 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC15.38■□□□□ 0.05
PRUNE2Q8WUY3 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.38■□□□□ 0.05
PRUNE2Q8WUY3 TRMT112P3-201ENST00000580149 358 ntBASIC15.38■□□□□ 0.05
PRUNE2Q8WUY3 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRUNE2Q8WUY3 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC15.38■□□□□ 0.05
PRUNE2Q8WUY3 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRUNE2Q8WUY3 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRUNE2Q8WUY3 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC15.38■□□□□ 0.05
PRUNE2Q8WUY3 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.38■□□□□ 0.05
PRUNE2Q8WUY3 AC006504.5-208ENST00000588784 2401 ntBASIC15.38■□□□□ 0.05
PRUNE2Q8WUY3 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PRUNE2Q8WUY3 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRUNE2Q8WUY3 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PRUNE2Q8WUY3 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRUNE2Q8WUY3 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.38■□□□□ 0.05
PRUNE2Q8WUY3 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.38■□□□□ 0.05
PRUNE2Q8WUY3 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRUNE2Q8WUY3 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC15.38■□□□□ 0.05
PRUNE2Q8WUY3 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRUNE2Q8WUY3 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.38■□□□□ 0.05
PRUNE2Q8WUY3 HLF-202ENST00000430986 1385 ntTSL 2 BASIC15.38■□□□□ 0.05
PRUNE2Q8WUY3 IL37-204ENST00000352179 709 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRUNE2Q8WUY3 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PRUNE2Q8WUY3 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
PRUNE2Q8WUY3 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
PRUNE2Q8WUY3 AL513165.2-203ENST00000537239 717 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
PRUNE2Q8WUY3 AP003785.1-201ENST00000544959 492 ntTSL 4 BASIC15.38■□□□□ 0.05
PRUNE2Q8WUY3 CDIPT-AS1-202ENST00000565014 729 ntTSL 2 BASIC15.38■□□□□ 0.05
PRUNE2Q8WUY3 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC15.38■□□□□ 0.05
PRUNE2Q8WUY3 LINC01588-216ENST00000623502 975 ntTSL 2 BASIC15.38■□□□□ 0.05
PRUNE2Q8WUY3 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.38■□□□□ 0.05
PRUNE2Q8WUY3 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRUNE2Q8WUY3 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC15.38■□□□□ 0.05
PRUNE2Q8WUY3 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.38■□□□□ 0.05
PRUNE2Q8WUY3 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRUNE2Q8WUY3 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRUNE2Q8WUY3 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PRUNE2Q8WUY3 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PRUNE2Q8WUY3 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PRUNE2Q8WUY3 ALG1L3P-201ENST00000503331 765 ntBASIC15.37■□□□□ 0.05
PRUNE2Q8WUY3 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC15.37■□□□□ 0.05
PRUNE2Q8WUY3 F11R-204ENST00000537746 1245 ntTSL 2 BASIC15.37■□□□□ 0.05
PRUNE2Q8WUY3 AC068831.5-201ENST00000557387 328 ntBASIC15.37■□□□□ 0.05
PRUNE2Q8WUY3 AC009093.2-201ENST00000563477 546 ntTSL 4 BASIC15.37■□□□□ 0.05
PRUNE2Q8WUY3 MIR3188-201ENST00000583494 85 ntBASIC15.37■□□□□ 0.05
PRUNE2Q8WUY3 AP000769.1-203ENST00000637245 208 ntBASIC15.37■□□□□ 0.05
PRUNE2Q8WUY3 FCGR3A-208ENST00000638849 873 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PRUNE2Q8WUY3 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PRUNE2Q8WUY3 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PRUNE2Q8WUY3 AL360270.3-201ENST00000609118 1348 ntBASIC15.37■□□□□ 0.05
PRUNE2Q8WUY3 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
PRUNE2Q8WUY3 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PRUNE2Q8WUY3 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PRUNE2Q8WUY3 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PRUNE2Q8WUY3 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
PRUNE2Q8WUY3 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
PRUNE2Q8WUY3 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
PRUNE2Q8WUY3 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
PRUNE2Q8WUY3 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC15.37■□□□□ 0.05
PRUNE2Q8WUY3 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC15.37■□□□□ 0.05
PRUNE2Q8WUY3 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.37■□□□□ 0.05
PRUNE2Q8WUY3 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC15.37■□□□□ 0.05
PRUNE2Q8WUY3 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PRUNE2Q8WUY3 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
PRUNE2Q8WUY3 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PRUNE2Q8WUY3 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PRUNE2Q8WUY3 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PRUNE2Q8WUY3 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
PRUNE2Q8WUY3 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PRUNE2Q8WUY3 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.37■□□□□ 0.05
PRUNE2Q8WUY3 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
PRUNE2Q8WUY3 XBP1P1-201ENST00000436573 652 ntBASIC15.37■□□□□ 0.05
PRUNE2Q8WUY3 IGHV1-12-201ENST00000518307 205 ntBASIC15.37■□□□□ 0.05
PRUNE2Q8WUY3 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.37■□□□□ 0.05
PRUNE2Q8WUY3 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC15.37■□□□□ 0.05
PRUNE2Q8WUY3 CADM1-221ENST00000612235 1042 ntTSL 5 BASIC15.37■□□□□ 0.05
PRUNE2Q8WUY3 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC15.37■□□□□ 0.05
PRUNE2Q8WUY3 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC15.37■□□□□ 0.05
PRUNE2Q8WUY3 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PRUNE2Q8WUY3 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.37■□□□□ 0.05
PRUNE2Q8WUY3 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PRUNE2Q8WUY3 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
PRUNE2Q8WUY3 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PRUNE2Q8WUY3 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PRUNE2Q8WUY3 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.36■□□□□ 0.05
PRUNE2Q8WUY3 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.36■□□□□ 0.05
PRUNE2Q8WUY3 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PRUNE2Q8WUY3 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
PRUNE2Q8WUY3 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC15.36■□□□□ 0.05
PRUNE2Q8WUY3 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC15.36■□□□□ 0.05
PRUNE2Q8WUY3 OR2A1-AS1-210ENST00000496968 531 ntBASIC15.36■□□□□ 0.05
PRUNE2Q8WUY3 BIRC5-211ENST00000592734 386 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PRUNE2Q8WUY3 NF1P11-201ENST00000621292 1282 ntBASIC15.36■□□□□ 0.05
PRUNE2Q8WUY3 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.36■□□□□ 0.05
PRUNE2Q8WUY3 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PRUNE2Q8WUY3 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
PRUNE2Q8WUY3 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.36■□□□□ 0.05
PRUNE2Q8WUY3 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PRUNE2Q8WUY3 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PRUNE2Q8WUY3 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms