Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.72□□□□□ -0.21
FNDC9Q8TBE3 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
FNDC9Q8TBE3 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
FNDC9Q8TBE3 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
FNDC9Q8TBE3 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
FNDC9Q8TBE3 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
FNDC9Q8TBE3 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.72□□□□□ -0.21
FNDC9Q8TBE3 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.72□□□□□ -0.21
FNDC9Q8TBE3 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
FNDC9Q8TBE3 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.72□□□□□ -0.21
FNDC9Q8TBE3 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
FNDC9Q8TBE3 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
FNDC9Q8TBE3 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
FNDC9Q8TBE3 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
FNDC9Q8TBE3 LBX2-201ENST00000341396 886 ntTSL 3 BASIC13.72□□□□□ -0.21
FNDC9Q8TBE3 MIR658-201ENST00000385210 100 ntBASIC13.72□□□□□ -0.21
FNDC9Q8TBE3 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
FNDC9Q8TBE3 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.72□□□□□ -0.21
FNDC9Q8TBE3 BOLA2P3-201ENST00000404566 256 ntBASIC13.72□□□□□ -0.21
FNDC9Q8TBE3 MIR1909-201ENST00000411312 80 ntBASIC13.72□□□□□ -0.21
FNDC9Q8TBE3 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.72□□□□□ -0.21
FNDC9Q8TBE3 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
FNDC9Q8TBE3 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC13.72□□□□□ -0.21
FNDC9Q8TBE3 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC13.72□□□□□ -0.21
FNDC9Q8TBE3 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
FNDC9Q8TBE3 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.72□□□□□ -0.21
FNDC9Q8TBE3 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC13.72□□□□□ -0.21
FNDC9Q8TBE3 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC13.72□□□□□ -0.21
FNDC9Q8TBE3 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
FNDC9Q8TBE3 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
FNDC9Q8TBE3 PFAS-212ENST00000625942 396 ntTSL 5 BASIC13.72□□□□□ -0.21
FNDC9Q8TBE3 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.72□□□□□ -0.21
FNDC9Q8TBE3 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
FNDC9Q8TBE3 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.72□□□□□ -0.21
FNDC9Q8TBE3 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
FNDC9Q8TBE3 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13.72□□□□□ -0.21
FNDC9Q8TBE3 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
FNDC9Q8TBE3 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
FNDC9Q8TBE3 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
FNDC9Q8TBE3 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
FNDC9Q8TBE3 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
FNDC9Q8TBE3 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.72□□□□□ -0.21
FNDC9Q8TBE3 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
FNDC9Q8TBE3 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
FNDC9Q8TBE3 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
FNDC9Q8TBE3 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.72□□□□□ -0.21
FNDC9Q8TBE3 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
FNDC9Q8TBE3 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.71□□□□□ -0.21
FNDC9Q8TBE3 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
FNDC9Q8TBE3 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
FNDC9Q8TBE3 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
FNDC9Q8TBE3 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.71□□□□□ -0.21
FNDC9Q8TBE3 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
FNDC9Q8TBE3 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.71□□□□□ -0.21
FNDC9Q8TBE3 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.71□□□□□ -0.21
FNDC9Q8TBE3 AC007787.1-201ENST00000588095 1583 ntBASIC13.71□□□□□ -0.21
FNDC9Q8TBE3 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.71□□□□□ -0.21
FNDC9Q8TBE3 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
FNDC9Q8TBE3 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
FNDC9Q8TBE3 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
FNDC9Q8TBE3 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
FNDC9Q8TBE3 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.71□□□□□ -0.21
FNDC9Q8TBE3 AC093525.8-201ENST00000624099 1342 ntBASIC13.71□□□□□ -0.21
FNDC9Q8TBE3 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
FNDC9Q8TBE3 PDIA3P1-201ENST00000471856 1510 ntBASIC13.71□□□□□ -0.21
FNDC9Q8TBE3 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
FNDC9Q8TBE3 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
FNDC9Q8TBE3 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
FNDC9Q8TBE3 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
FNDC9Q8TBE3 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
FNDC9Q8TBE3 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
FNDC9Q8TBE3 RNU1-114P-201ENST00000365297 166 ntBASIC13.71□□□□□ -0.21
FNDC9Q8TBE3 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
FNDC9Q8TBE3 AC092933.1-201ENST00000393644 945 ntBASIC13.71□□□□□ -0.21
FNDC9Q8TBE3 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
FNDC9Q8TBE3 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC13.71□□□□□ -0.21
FNDC9Q8TBE3 AC022210.1-201ENST00000449856 793 ntBASIC13.71□□□□□ -0.21
FNDC9Q8TBE3 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.71□□□□□ -0.21
FNDC9Q8TBE3 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.71□□□□□ -0.21
FNDC9Q8TBE3 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
FNDC9Q8TBE3 SAMD11P1-201ENST00000571429 661 ntBASIC13.71□□□□□ -0.21
FNDC9Q8TBE3 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC13.71□□□□□ -0.21
FNDC9Q8TBE3 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
FNDC9Q8TBE3 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC13.71□□□□□ -0.21
FNDC9Q8TBE3 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.71□□□□□ -0.21
FNDC9Q8TBE3 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
FNDC9Q8TBE3 AL645728.2-202ENST00000641679 227 ntBASIC13.71□□□□□ -0.21
FNDC9Q8TBE3 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
FNDC9Q8TBE3 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.71□□□□□ -0.21
FNDC9Q8TBE3 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
FNDC9Q8TBE3 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
FNDC9Q8TBE3 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
FNDC9Q8TBE3 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
FNDC9Q8TBE3 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
FNDC9Q8TBE3 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
FNDC9Q8TBE3 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
FNDC9Q8TBE3 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.71□□□□□ -0.22
FNDC9Q8TBE3 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
FNDC9Q8TBE3 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
FNDC9Q8TBE3 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms