Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
BEST2Q8NFU1 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BEST2Q8NFU1 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BEST2Q8NFU1 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
BEST2Q8NFU1 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
BEST2Q8NFU1 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BEST2Q8NFU1 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BEST2Q8NFU1 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BEST2Q8NFU1 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
BEST2Q8NFU1 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC16.29■□□□□ 0.2
BEST2Q8NFU1 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
BEST2Q8NFU1 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
BEST2Q8NFU1 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
BEST2Q8NFU1 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC16.29■□□□□ 0.2
BEST2Q8NFU1 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BEST2Q8NFU1 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC16.29■□□□□ 0.2
BEST2Q8NFU1 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC16.29■□□□□ 0.2
BEST2Q8NFU1 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC16.29■□□□□ 0.2
BEST2Q8NFU1 AC010328.2-201ENST00000597698 1111 ntBASIC16.29■□□□□ 0.2
BEST2Q8NFU1 AC004466.1-201ENST00000599515 1080 ntBASIC16.29■□□□□ 0.2
BEST2Q8NFU1 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
BEST2Q8NFU1 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
BEST2Q8NFU1 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BEST2Q8NFU1 PCDHA3-202ENST00000532566 4594 ntBASIC16.29■□□□□ 0.2
BEST2Q8NFU1 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
BEST2Q8NFU1 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC16.29■□□□□ 0.2
BEST2Q8NFU1 ANKRD30BP2-201ENST00000435744 1610 ntBASIC16.29■□□□□ 0.2
BEST2Q8NFU1 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BEST2Q8NFU1 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BEST2Q8NFU1 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
BEST2Q8NFU1 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
BEST2Q8NFU1 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
BEST2Q8NFU1 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BEST2Q8NFU1 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
BEST2Q8NFU1 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
BEST2Q8NFU1 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
BEST2Q8NFU1 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BEST2Q8NFU1 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BEST2Q8NFU1 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
BEST2Q8NFU1 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BEST2Q8NFU1 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
BEST2Q8NFU1 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
BEST2Q8NFU1 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BEST2Q8NFU1 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
BEST2Q8NFU1 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
BEST2Q8NFU1 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BEST2Q8NFU1 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.28■□□□□ 0.2
BEST2Q8NFU1 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
BEST2Q8NFU1 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BEST2Q8NFU1 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
BEST2Q8NFU1 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
BEST2Q8NFU1 AC022494.1-201ENST00000466044 728 ntBASIC16.28■□□□□ 0.2
BEST2Q8NFU1 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
BEST2Q8NFU1 PFN2-215ENST00000497148 743 ntTSL 4 BASIC16.28■□□□□ 0.2
BEST2Q8NFU1 MESTP3-201ENST00000503460 968 ntBASIC16.28■□□□□ 0.2
BEST2Q8NFU1 FTLP10-202ENST00000505798 471 ntBASIC16.28■□□□□ 0.2
BEST2Q8NFU1 PACS1-203ENST00000524815 628 ntTSL 4 BASIC16.28■□□□□ 0.2
BEST2Q8NFU1 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC16.28■□□□□ 0.2
BEST2Q8NFU1 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
BEST2Q8NFU1 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC16.28■□□□□ 0.2
BEST2Q8NFU1 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC16.28■□□□□ 0.2
BEST2Q8NFU1 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC16.28■□□□□ 0.2
BEST2Q8NFU1 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.28■□□□□ 0.2
BEST2Q8NFU1 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
BEST2Q8NFU1 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
BEST2Q8NFU1 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.28■□□□□ 0.2
BEST2Q8NFU1 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
BEST2Q8NFU1 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
BEST2Q8NFU1 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BEST2Q8NFU1 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
BEST2Q8NFU1 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
BEST2Q8NFU1 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
BEST2Q8NFU1 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
BEST2Q8NFU1 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BEST2Q8NFU1 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
BEST2Q8NFU1 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BEST2Q8NFU1 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.28■□□□□ 0.2
BEST2Q8NFU1 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
BEST2Q8NFU1 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
BEST2Q8NFU1 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
BEST2Q8NFU1 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
BEST2Q8NFU1 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
BEST2Q8NFU1 AC013268.4-201ENST00000637413 2228 ntBASIC16.27■□□□□ 0.2
BEST2Q8NFU1 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.27■□□□□ 0.2
BEST2Q8NFU1 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.27■□□□□ 0.2
BEST2Q8NFU1 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC16.27■□□□□ 0.2
BEST2Q8NFU1 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
BEST2Q8NFU1 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.27■□□□□ 0.2
BEST2Q8NFU1 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.27■□□□□ 0.2
BEST2Q8NFU1 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
BEST2Q8NFU1 CLUHP2-201ENST00000426660 1303 ntBASIC16.27■□□□□ 0.2
BEST2Q8NFU1 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
BEST2Q8NFU1 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
BEST2Q8NFU1 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
BEST2Q8NFU1 SNX21-203ENST00000372541 771 ntTSL 2 BASIC16.27■□□□□ 0.2
BEST2Q8NFU1 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
BEST2Q8NFU1 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC16.27■□□□□ 0.2
BEST2Q8NFU1 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC16.27■□□□□ 0.2
BEST2Q8NFU1 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC16.27■□□□□ 0.2
BEST2Q8NFU1 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms