Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC13.72□□□□□ -0.21
BBS1Q8NFJ9 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
BBS1Q8NFJ9 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
BBS1Q8NFJ9 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC13.72□□□□□ -0.21
BBS1Q8NFJ9 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
BBS1Q8NFJ9 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC13.72□□□□□ -0.21
BBS1Q8NFJ9 AL671883.3-201ENST00000603274 991 ntBASIC13.72□□□□□ -0.21
BBS1Q8NFJ9 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC13.72□□□□□ -0.21
BBS1Q8NFJ9 AC152010.1-201ENST00000415779 2006 ntBASIC13.72□□□□□ -0.21
BBS1Q8NFJ9 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
BBS1Q8NFJ9 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.72□□□□□ -0.21
BBS1Q8NFJ9 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.72□□□□□ -0.21
BBS1Q8NFJ9 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.72□□□□□ -0.21
BBS1Q8NFJ9 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
BBS1Q8NFJ9 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
BBS1Q8NFJ9 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
BBS1Q8NFJ9 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
BBS1Q8NFJ9 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
BBS1Q8NFJ9 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
BBS1Q8NFJ9 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
BBS1Q8NFJ9 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
BBS1Q8NFJ9 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
BBS1Q8NFJ9 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
BBS1Q8NFJ9 AC015802.1-201ENST00000588104 1449 ntBASIC13.72□□□□□ -0.21
BBS1Q8NFJ9 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
BBS1Q8NFJ9 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
BBS1Q8NFJ9 ST20-AS1-201ENST00000560255 4223 ntBASIC13.72□□□□□ -0.21
BBS1Q8NFJ9 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.72□□□□□ -0.21
BBS1Q8NFJ9 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
BBS1Q8NFJ9 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
BBS1Q8NFJ9 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
BBS1Q8NFJ9 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
BBS1Q8NFJ9 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
BBS1Q8NFJ9 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
BBS1Q8NFJ9 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
BBS1Q8NFJ9 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.71□□□□□ -0.21
BBS1Q8NFJ9 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
BBS1Q8NFJ9 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
BBS1Q8NFJ9 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
BBS1Q8NFJ9 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
BBS1Q8NFJ9 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
BBS1Q8NFJ9 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
BBS1Q8NFJ9 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
BBS1Q8NFJ9 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
BBS1Q8NFJ9 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
BBS1Q8NFJ9 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
BBS1Q8NFJ9 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
BBS1Q8NFJ9 AL157414.3-201ENST00000624276 1954 ntBASIC13.71□□□□□ -0.21
BBS1Q8NFJ9 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
BBS1Q8NFJ9 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
BBS1Q8NFJ9 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
BBS1Q8NFJ9 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
BBS1Q8NFJ9 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.71□□□□□ -0.21
BBS1Q8NFJ9 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
BBS1Q8NFJ9 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
BBS1Q8NFJ9 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
BBS1Q8NFJ9 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
BBS1Q8NFJ9 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
BBS1Q8NFJ9 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
BBS1Q8NFJ9 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
BBS1Q8NFJ9 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
BBS1Q8NFJ9 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
BBS1Q8NFJ9 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC13.71□□□□□ -0.21
BBS1Q8NFJ9 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC13.71□□□□□ -0.21
BBS1Q8NFJ9 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
BBS1Q8NFJ9 AP000344.2-201ENST00000512987 629 ntBASIC13.71□□□□□ -0.21
BBS1Q8NFJ9 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
BBS1Q8NFJ9 AL512361.1-201ENST00000554200 418 ntBASIC13.71□□□□□ -0.21
BBS1Q8NFJ9 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC13.71□□□□□ -0.21
BBS1Q8NFJ9 AC004835.2-201ENST00000603762 682 ntBASIC13.71□□□□□ -0.21
BBS1Q8NFJ9 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC13.71□□□□□ -0.21
BBS1Q8NFJ9 HOTTIP_1.1-201ENST00000620415 57 ntBASIC13.71□□□□□ -0.21
BBS1Q8NFJ9 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.71□□□□□ -0.21
BBS1Q8NFJ9 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
BBS1Q8NFJ9 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
BBS1Q8NFJ9 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
BBS1Q8NFJ9 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
BBS1Q8NFJ9 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.71□□□□□ -0.21
BBS1Q8NFJ9 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
BBS1Q8NFJ9 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
BBS1Q8NFJ9 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
BBS1Q8NFJ9 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
BBS1Q8NFJ9 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.71□□□□□ -0.22
BBS1Q8NFJ9 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
BBS1Q8NFJ9 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
BBS1Q8NFJ9 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
BBS1Q8NFJ9 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.71□□□□□ -0.22
BBS1Q8NFJ9 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
BBS1Q8NFJ9 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.7□□□□□ -0.22
BBS1Q8NFJ9 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
BBS1Q8NFJ9 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.7□□□□□ -0.22
BBS1Q8NFJ9 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
BBS1Q8NFJ9 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
BBS1Q8NFJ9 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
BBS1Q8NFJ9 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.7□□□□□ -0.22
BBS1Q8NFJ9 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
BBS1Q8NFJ9 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
BBS1Q8NFJ9 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
BBS1Q8NFJ9 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
BBS1Q8NFJ9 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms