Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.25□□□□□ -0.13
NUP43Q8NFH3 AC007431.3-201ENST00000623221 587 ntBASIC14.25□□□□□ -0.13
NUP43Q8NFH3 BX539320.1-201ENST00000623759 877 ntBASIC14.25□□□□□ -0.13
NUP43Q8NFH3 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NUP43Q8NFH3 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NUP43Q8NFH3 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NUP43Q8NFH3 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NUP43Q8NFH3 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NUP43Q8NFH3 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.25□□□□□ -0.13
NUP43Q8NFH3 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
NUP43Q8NFH3 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NUP43Q8NFH3 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.25□□□□□ -0.13
NUP43Q8NFH3 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NUP43Q8NFH3 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
NUP43Q8NFH3 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.25□□□□□ -0.13
NUP43Q8NFH3 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.25□□□□□ -0.13
NUP43Q8NFH3 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NUP43Q8NFH3 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.25□□□□□ -0.13
NUP43Q8NFH3 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NUP43Q8NFH3 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NUP43Q8NFH3 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NUP43Q8NFH3 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
NUP43Q8NFH3 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.24□□□□□ -0.13
NUP43Q8NFH3 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.24□□□□□ -0.13
NUP43Q8NFH3 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.24□□□□□ -0.13
NUP43Q8NFH3 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NUP43Q8NFH3 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
NUP43Q8NFH3 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NUP43Q8NFH3 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.24□□□□□ -0.13
NUP43Q8NFH3 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.24□□□□□ -0.13
NUP43Q8NFH3 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
NUP43Q8NFH3 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NUP43Q8NFH3 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
NUP43Q8NFH3 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NUP43Q8NFH3 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NUP43Q8NFH3 FAM45BP-202ENST00000592932 1624 ntBASIC14.24□□□□□ -0.13
NUP43Q8NFH3 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NUP43Q8NFH3 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NUP43Q8NFH3 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NUP43Q8NFH3 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.24□□□□□ -0.13
NUP43Q8NFH3 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NUP43Q8NFH3 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NUP43Q8NFH3 AC087499.6-201ENST00000411576 835 ntBASIC14.24□□□□□ -0.13
NUP43Q8NFH3 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NUP43Q8NFH3 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.24□□□□□ -0.13
NUP43Q8NFH3 BCRP1-201ENST00000444246 691 ntBASIC14.24□□□□□ -0.13
NUP43Q8NFH3 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.24□□□□□ -0.13
NUP43Q8NFH3 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.24□□□□□ -0.13
NUP43Q8NFH3 AC092552.1-201ENST00000547243 906 ntBASIC14.24□□□□□ -0.13
NUP43Q8NFH3 LINC02560-201ENST00000596379 459 ntBASIC14.24□□□□□ -0.13
NUP43Q8NFH3 AL355385.1-201ENST00000606123 409 ntBASIC14.24□□□□□ -0.13
NUP43Q8NFH3 AL096865.1-201ENST00000606796 927 ntBASIC14.24□□□□□ -0.13
NUP43Q8NFH3 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NUP43Q8NFH3 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.24□□□□□ -0.13
NUP43Q8NFH3 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.24□□□□□ -0.13
NUP43Q8NFH3 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NUP43Q8NFH3 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NUP43Q8NFH3 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.24□□□□□ -0.13
NUP43Q8NFH3 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
NUP43Q8NFH3 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NUP43Q8NFH3 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NUP43Q8NFH3 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NUP43Q8NFH3 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.24□□□□□ -0.13
NUP43Q8NFH3 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.24□□□□□ -0.13
NUP43Q8NFH3 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NUP43Q8NFH3 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
NUP43Q8NFH3 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NUP43Q8NFH3 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NUP43Q8NFH3 AC232323.1-201ENST00000540724 2099 ntBASIC14.24□□□□□ -0.13
NUP43Q8NFH3 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
NUP43Q8NFH3 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.24□□□□□ -0.13
NUP43Q8NFH3 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NUP43Q8NFH3 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
NUP43Q8NFH3 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NUP43Q8NFH3 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.24□□□□□ -0.13
NUP43Q8NFH3 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NUP43Q8NFH3 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
NUP43Q8NFH3 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NUP43Q8NFH3 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NUP43Q8NFH3 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NUP43Q8NFH3 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.23□□□□□ -0.13
NUP43Q8NFH3 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.23□□□□□ -0.13
NUP43Q8NFH3 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
NUP43Q8NFH3 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.23□□□□□ -0.13
NUP43Q8NFH3 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NUP43Q8NFH3 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NUP43Q8NFH3 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.23□□□□□ -0.13
NUP43Q8NFH3 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
NUP43Q8NFH3 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NUP43Q8NFH3 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NUP43Q8NFH3 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.23□□□□□ -0.13
NUP43Q8NFH3 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NUP43Q8NFH3 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NUP43Q8NFH3 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NUP43Q8NFH3 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NUP43Q8NFH3 LINC00552-201ENST00000625151 2579 ntBASIC14.23□□□□□ -0.13
NUP43Q8NFH3 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
NUP43Q8NFH3 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.23□□□□□ -0.13
NUP43Q8NFH3 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.23□□□□□ -0.13
NUP43Q8NFH3 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms