Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 KRT8P31-201ENST00000504812 1408 ntBASIC23.11■■□□□ 1.29
CFAP43Q8NDM7 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CFAP43Q8NDM7 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CFAP43Q8NDM7 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC23.11■■□□□ 1.29
CFAP43Q8NDM7 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC23.11■■□□□ 1.29
CFAP43Q8NDM7 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CFAP43Q8NDM7 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC23.11■■□□□ 1.29
CFAP43Q8NDM7 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
CFAP43Q8NDM7 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CFAP43Q8NDM7 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC23.1■■□□□ 1.29
CFAP43Q8NDM7 AL583805.1-201ENST00000391389 531 ntBASIC23.1■■□□□ 1.29
CFAP43Q8NDM7 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
CFAP43Q8NDM7 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
CFAP43Q8NDM7 AL627422.1-201ENST00000434104 580 ntBASIC23.1■■□□□ 1.29
CFAP43Q8NDM7 CICP12-201ENST00000455801 843 ntBASIC23.1■■□□□ 1.29
CFAP43Q8NDM7 AC008723.1-201ENST00000506922 207 ntBASIC23.1■■□□□ 1.29
CFAP43Q8NDM7 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
CFAP43Q8NDM7 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC23.1■■□□□ 1.29
CFAP43Q8NDM7 C2orf69P1-201ENST00000563532 1093 ntBASIC23.1■■□□□ 1.29
CFAP43Q8NDM7 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC23.1■■□□□ 1.29
CFAP43Q8NDM7 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CFAP43Q8NDM7 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
CFAP43Q8NDM7 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CFAP43Q8NDM7 PARN-202ENST00000420015 2360 ntTSL 2 BASIC23.1■■□□□ 1.29
CFAP43Q8NDM7 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CFAP43Q8NDM7 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
CFAP43Q8NDM7 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC23.1■■□□□ 1.29
CFAP43Q8NDM7 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC23.1■■□□□ 1.29
CFAP43Q8NDM7 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC23.1■■□□□ 1.29
CFAP43Q8NDM7 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC23.1■■□□□ 1.29
CFAP43Q8NDM7 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC23.1■■□□□ 1.29
CFAP43Q8NDM7 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC23.1■■□□□ 1.29
CFAP43Q8NDM7 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
CFAP43Q8NDM7 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CFAP43Q8NDM7 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CFAP43Q8NDM7 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CFAP43Q8NDM7 POLD4-208ENST00000532830 904 ntTSL 3 BASIC23.09■■□□□ 1.29
CFAP43Q8NDM7 RN7SL596P-201ENST00000582123 288 ntBASIC23.09■■□□□ 1.29
CFAP43Q8NDM7 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC23.09■■□□□ 1.29
CFAP43Q8NDM7 AC084781.1-201ENST00000613737 656 ntBASIC23.09■■□□□ 1.29
CFAP43Q8NDM7 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CFAP43Q8NDM7 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC23.09■■□□□ 1.29
CFAP43Q8NDM7 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC23.09■■□□□ 1.29
CFAP43Q8NDM7 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
CFAP43Q8NDM7 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
CFAP43Q8NDM7 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CFAP43Q8NDM7 AC013726.1-201ENST00000563747 2285 ntBASIC23.09■■□□□ 1.29
CFAP43Q8NDM7 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CFAP43Q8NDM7 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC23.09■■□□□ 1.29
CFAP43Q8NDM7 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CFAP43Q8NDM7 AC006486.2-201ENST00000624246 2199 ntBASIC23.09■■□□□ 1.29
CFAP43Q8NDM7 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
CFAP43Q8NDM7 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CFAP43Q8NDM7 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CFAP43Q8NDM7 CYP4F23P-201ENST00000593402 1579 ntBASIC23.09■■□□□ 1.29
CFAP43Q8NDM7 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC23.09■■□□□ 1.29
CFAP43Q8NDM7 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CFAP43Q8NDM7 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC23.09■■□□□ 1.29
CFAP43Q8NDM7 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CFAP43Q8NDM7 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC23.09■■□□□ 1.29
CFAP43Q8NDM7 BX088702.1-201ENST00000610784 235 ntBASIC23.09■■□□□ 1.29
CFAP43Q8NDM7 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC23.09■■□□□ 1.29
CFAP43Q8NDM7 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC23.09■■□□□ 1.29
CFAP43Q8NDM7 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CFAP43Q8NDM7 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC23.08■■□□□ 1.29
CFAP43Q8NDM7 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CFAP43Q8NDM7 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CFAP43Q8NDM7 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
CFAP43Q8NDM7 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.29
CFAP43Q8NDM7 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CFAP43Q8NDM7 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CFAP43Q8NDM7 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CFAP43Q8NDM7 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CFAP43Q8NDM7 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC23.08■■□□□ 1.29
CFAP43Q8NDM7 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
CFAP43Q8NDM7 AC091951.1-201ENST00000512854 2465 ntBASIC23.08■■□□□ 1.29
CFAP43Q8NDM7 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CFAP43Q8NDM7 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CFAP43Q8NDM7 FAU-202ENST00000434372 533 ntTSL 2 BASIC23.08■■□□□ 1.29
CFAP43Q8NDM7 CCNC-217ENST00000523985 958 ntTSL 2 BASIC23.08■■□□□ 1.29
CFAP43Q8NDM7 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC23.08■■□□□ 1.29
CFAP43Q8NDM7 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC23.08■■□□□ 1.29
CFAP43Q8NDM7 DNM1P51-201ENST00000558149 522 ntBASIC23.08■■□□□ 1.29
CFAP43Q8NDM7 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC23.08■■□□□ 1.29
CFAP43Q8NDM7 AC107464.3-201ENST00000609172 737 ntBASIC23.08■■□□□ 1.29
CFAP43Q8NDM7 MIR6720-201ENST00000611664 98 ntBASIC23.08■■□□□ 1.29
CFAP43Q8NDM7 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
CFAP43Q8NDM7 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
CFAP43Q8NDM7 ABR-203ENST00000536794 2213 ntTSL 2 BASIC23.08■■□□□ 1.29
CFAP43Q8NDM7 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC23.08■■□□□ 1.28
CFAP43Q8NDM7 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC23.08■■□□□ 1.28
CFAP43Q8NDM7 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
CFAP43Q8NDM7 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
CFAP43Q8NDM7 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
CFAP43Q8NDM7 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
CFAP43Q8NDM7 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
CFAP43Q8NDM7 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
CFAP43Q8NDM7 KHSRPP1-201ENST00000427983 1768 ntBASIC23.07■■□□□ 1.28
CFAP43Q8NDM7 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CFAP43Q8NDM7 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC23.07■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms