Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC33Q8N5R6 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC16■□□□□ 0.15
CCDC33Q8N5R6 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CCDC33Q8N5R6 AGAP7P-201ENST00000582299 2062 ntBASIC15.99■□□□□ 0.15
CCDC33Q8N5R6 AGAP14-201ENST00000624701 2060 ntBASIC15.99■□□□□ 0.15
CCDC33Q8N5R6 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC33Q8N5R6 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.99■□□□□ 0.15
CCDC33Q8N5R6 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.99■□□□□ 0.15
CCDC33Q8N5R6 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC33Q8N5R6 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.99■□□□□ 0.15
CCDC33Q8N5R6 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC33Q8N5R6 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CCDC33Q8N5R6 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.99■□□□□ 0.15
CCDC33Q8N5R6 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC15.99■□□□□ 0.15
CCDC33Q8N5R6 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC33Q8N5R6 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.99■□□□□ 0.15
CCDC33Q8N5R6 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC33Q8N5R6 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.99■□□□□ 0.15
CCDC33Q8N5R6 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC33Q8N5R6 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC33Q8N5R6 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC33Q8N5R6 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.99■□□□□ 0.15
CCDC33Q8N5R6 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CCDC33Q8N5R6 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC33Q8N5R6 FAM8A2P-201ENST00000528813 1142 ntBASIC15.99■□□□□ 0.15
CCDC33Q8N5R6 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC33Q8N5R6 ENPP7P5-201ENST00000541031 1031 ntBASIC15.99■□□□□ 0.15
CCDC33Q8N5R6 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC15.99■□□□□ 0.15
CCDC33Q8N5R6 AL583810.1-201ENST00000553344 1045 ntBASIC15.99■□□□□ 0.15
CCDC33Q8N5R6 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC15.99■□□□□ 0.15
CCDC33Q8N5R6 AC120045.2-201ENST00000567334 178 ntBASIC15.99■□□□□ 0.15
CCDC33Q8N5R6 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.99■□□□□ 0.15
CCDC33Q8N5R6 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.99■□□□□ 0.15
CCDC33Q8N5R6 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.99■□□□□ 0.15
CCDC33Q8N5R6 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.99■□□□□ 0.15
CCDC33Q8N5R6 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.99■□□□□ 0.15
CCDC33Q8N5R6 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC33Q8N5R6 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CCDC33Q8N5R6 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
CCDC33Q8N5R6 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.99■□□□□ 0.15
CCDC33Q8N5R6 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.99■□□□□ 0.15
CCDC33Q8N5R6 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC33Q8N5R6 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC33Q8N5R6 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CCDC33Q8N5R6 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC33Q8N5R6 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC33Q8N5R6 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC33Q8N5R6 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.99■□□□□ 0.15
CCDC33Q8N5R6 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC33Q8N5R6 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.99■□□□□ 0.15
CCDC33Q8N5R6 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC33Q8N5R6 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CCDC33Q8N5R6 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CCDC33Q8N5R6 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC33Q8N5R6 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.98■□□□□ 0.15
CCDC33Q8N5R6 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC33Q8N5R6 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.98■□□□□ 0.15
CCDC33Q8N5R6 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC33Q8N5R6 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
CCDC33Q8N5R6 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CCDC33Q8N5R6 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC33Q8N5R6 AC106881.1-201ENST00000605849 3329 ntBASIC15.98■□□□□ 0.15
CCDC33Q8N5R6 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CCDC33Q8N5R6 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.98■□□□□ 0.15
CCDC33Q8N5R6 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.98■□□□□ 0.15
CCDC33Q8N5R6 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.98■□□□□ 0.15
CCDC33Q8N5R6 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC33Q8N5R6 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.98■□□□□ 0.15
CCDC33Q8N5R6 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC33Q8N5R6 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC33Q8N5R6 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC33Q8N5R6 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC33Q8N5R6 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC33Q8N5R6 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC33Q8N5R6 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC15.98■□□□□ 0.15
CCDC33Q8N5R6 ACTBP11-201ENST00000436287 1126 ntBASIC15.98■□□□□ 0.15
CCDC33Q8N5R6 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC33Q8N5R6 RPL13AP25-201ENST00000484130 612 ntBASIC15.98■□□□□ 0.15
CCDC33Q8N5R6 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC15.98■□□□□ 0.15
CCDC33Q8N5R6 AP001889.1-201ENST00000525414 633 ntBASIC15.98■□□□□ 0.15
CCDC33Q8N5R6 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.98■□□□□ 0.15
CCDC33Q8N5R6 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.98■□□□□ 0.15
CCDC33Q8N5R6 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.98■□□□□ 0.15
CCDC33Q8N5R6 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC15.98■□□□□ 0.15
CCDC33Q8N5R6 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC33Q8N5R6 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
CCDC33Q8N5R6 AC025181.2-201ENST00000606994 802 ntBASIC15.98■□□□□ 0.15
CCDC33Q8N5R6 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC33Q8N5R6 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC33Q8N5R6 GPR182-203ENST00000622922 591 ntBASIC15.98■□□□□ 0.15
CCDC33Q8N5R6 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
CCDC33Q8N5R6 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.98■□□□□ 0.15
CCDC33Q8N5R6 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
CCDC33Q8N5R6 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.98■□□□□ 0.15
CCDC33Q8N5R6 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC33Q8N5R6 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.98■□□□□ 0.15
CCDC33Q8N5R6 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC33Q8N5R6 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.98■□□□□ 0.15
CCDC33Q8N5R6 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC33Q8N5R6 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms