Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
SYNE4Q8N205 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
SYNE4Q8N205 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SYNE4Q8N205 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SYNE4Q8N205 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SYNE4Q8N205 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SYNE4Q8N205 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SYNE4Q8N205 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SYNE4Q8N205 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.69■□□□□ 0.58
SYNE4Q8N205 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC18.69■□□□□ 0.58
SYNE4Q8N205 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SYNE4Q8N205 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SYNE4Q8N205 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC18.69■□□□□ 0.58
SYNE4Q8N205 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SYNE4Q8N205 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SYNE4Q8N205 MBLAC2-202ENST00000514906 1936 ntBASIC18.68■□□□□ 0.58
SYNE4Q8N205 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SYNE4Q8N205 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SYNE4Q8N205 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SYNE4Q8N205 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
SYNE4Q8N205 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC18.68■□□□□ 0.58
SYNE4Q8N205 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC18.68■□□□□ 0.58
SYNE4Q8N205 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SYNE4Q8N205 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SYNE4Q8N205 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SYNE4Q8N205 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
SYNE4Q8N205 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC18.68■□□□□ 0.58
SYNE4Q8N205 TUBB8P8-201ENST00000458717 1058 ntBASIC18.68■□□□□ 0.58
SYNE4Q8N205 MARK2P5-201ENST00000507649 634 ntBASIC18.68■□□□□ 0.58
SYNE4Q8N205 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC18.68■□□□□ 0.58
SYNE4Q8N205 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC18.68■□□□□ 0.58
SYNE4Q8N205 MIR3147-201ENST00000577811 66 ntBASIC18.68■□□□□ 0.58
SYNE4Q8N205 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC18.68■□□□□ 0.58
SYNE4Q8N205 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SYNE4Q8N205 AP000346.4-201ENST00000614827 381 ntBASIC18.68■□□□□ 0.58
SYNE4Q8N205 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
SYNE4Q8N205 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SYNE4Q8N205 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SYNE4Q8N205 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC18.68■□□□□ 0.58
SYNE4Q8N205 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC18.68■□□□□ 0.58
SYNE4Q8N205 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SYNE4Q8N205 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SYNE4Q8N205 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SYNE4Q8N205 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SYNE4Q8N205 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SYNE4Q8N205 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SYNE4Q8N205 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SYNE4Q8N205 AC136759.1-202ENST00000530858 2194 ntBASIC18.68■□□□□ 0.58
SYNE4Q8N205 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC18.68■□□□□ 0.58
SYNE4Q8N205 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC18.68■□□□□ 0.58
SYNE4Q8N205 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SYNE4Q8N205 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SYNE4Q8N205 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SYNE4Q8N205 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SYNE4Q8N205 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SYNE4Q8N205 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC18.67■□□□□ 0.58
SYNE4Q8N205 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC18.67■□□□□ 0.58
SYNE4Q8N205 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
SYNE4Q8N205 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SYNE4Q8N205 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SYNE4Q8N205 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC18.67■□□□□ 0.58
SYNE4Q8N205 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
SYNE4Q8N205 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SYNE4Q8N205 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC18.67■□□□□ 0.58
SYNE4Q8N205 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
SYNE4Q8N205 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC18.67■□□□□ 0.58
SYNE4Q8N205 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SYNE4Q8N205 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC18.67■□□□□ 0.58
SYNE4Q8N205 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC18.67■□□□□ 0.58
SYNE4Q8N205 CFL1-214ENST00000534769 758 ntTSL 2 BASIC18.67■□□□□ 0.58
SYNE4Q8N205 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC18.67■□□□□ 0.58
SYNE4Q8N205 AL161670.2-201ENST00000557650 1227 ntBASIC18.67■□□□□ 0.58
SYNE4Q8N205 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC18.67■□□□□ 0.58
SYNE4Q8N205 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SYNE4Q8N205 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SYNE4Q8N205 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SYNE4Q8N205 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SYNE4Q8N205 AMT-204ENST00000427987 1646 ntTSL 5 BASIC18.67■□□□□ 0.58
SYNE4Q8N205 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC18.67■□□□□ 0.58
SYNE4Q8N205 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SYNE4Q8N205 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SYNE4Q8N205 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SYNE4Q8N205 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC18.66■□□□□ 0.58
SYNE4Q8N205 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SYNE4Q8N205 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SYNE4Q8N205 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SYNE4Q8N205 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SYNE4Q8N205 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC18.66■□□□□ 0.58
SYNE4Q8N205 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SYNE4Q8N205 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.66■□□□□ 0.58
SYNE4Q8N205 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SYNE4Q8N205 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SYNE4Q8N205 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SYNE4Q8N205 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC18.66■□□□□ 0.58
SYNE4Q8N205 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SYNE4Q8N205 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SYNE4Q8N205 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC18.66■□□□□ 0.58
SYNE4Q8N205 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
SYNE4Q8N205 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SYNE4Q8N205 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms