Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC116Q8IYX3 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC116Q8IYX3 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.39□□□□□ -0.11
CCDC116Q8IYX3 AL360270.3-201ENST00000609118 1348 ntBASIC14.39□□□□□ -0.11
CCDC116Q8IYX3 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC116Q8IYX3 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC116Q8IYX3 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC116Q8IYX3 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CCDC116Q8IYX3 REXO1L5P-201ENST00000622260 2098 ntBASIC14.38□□□□□ -0.11
CCDC116Q8IYX3 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.38□□□□□ -0.11
CCDC116Q8IYX3 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.38□□□□□ -0.11
CCDC116Q8IYX3 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC116Q8IYX3 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC116Q8IYX3 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CCDC116Q8IYX3 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.38□□□□□ -0.11
CCDC116Q8IYX3 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.38□□□□□ -0.11
CCDC116Q8IYX3 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.38□□□□□ -0.11
CCDC116Q8IYX3 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CCDC116Q8IYX3 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC116Q8IYX3 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC116Q8IYX3 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CCDC116Q8IYX3 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC116Q8IYX3 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC116Q8IYX3 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC116Q8IYX3 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC116Q8IYX3 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CCDC116Q8IYX3 AL158070.2-201ENST00000623713 1621 ntBASIC14.38□□□□□ -0.11
CCDC116Q8IYX3 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.38□□□□□ -0.11
CCDC116Q8IYX3 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.38□□□□□ -0.11
CCDC116Q8IYX3 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC116Q8IYX3 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC116Q8IYX3 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC116Q8IYX3 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CCDC116Q8IYX3 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC116Q8IYX3 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC116Q8IYX3 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC116Q8IYX3 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.38□□□□□ -0.11
CCDC116Q8IYX3 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.38□□□□□ -0.11
CCDC116Q8IYX3 MYCLP2-201ENST00000449268 967 ntBASIC14.38□□□□□ -0.11
CCDC116Q8IYX3 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.38□□□□□ -0.11
CCDC116Q8IYX3 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC14.38□□□□□ -0.11
CCDC116Q8IYX3 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.38□□□□□ -0.11
CCDC116Q8IYX3 API5-211ENST00000534695 560 ntTSL 5 BASIC14.38□□□□□ -0.11
CCDC116Q8IYX3 AC092552.1-201ENST00000547243 906 ntBASIC14.38□□□□□ -0.11
CCDC116Q8IYX3 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.38□□□□□ -0.11
CCDC116Q8IYX3 AL359711.2-201ENST00000563105 872 ntBASIC14.38□□□□□ -0.11
CCDC116Q8IYX3 AC120045.2-201ENST00000567334 178 ntBASIC14.38□□□□□ -0.11
CCDC116Q8IYX3 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.38□□□□□ -0.11
CCDC116Q8IYX3 AC103798.2-201ENST00000624292 632 ntBASIC14.38□□□□□ -0.11
CCDC116Q8IYX3 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.38□□□□□ -0.11
CCDC116Q8IYX3 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC116Q8IYX3 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CCDC116Q8IYX3 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC116Q8IYX3 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC116Q8IYX3 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.38□□□□□ -0.11
CCDC116Q8IYX3 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CCDC116Q8IYX3 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC116Q8IYX3 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC116Q8IYX3 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.38□□□□□ -0.11
CCDC116Q8IYX3 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CCDC116Q8IYX3 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC116Q8IYX3 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC116Q8IYX3 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC116Q8IYX3 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC116Q8IYX3 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC116Q8IYX3 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
CCDC116Q8IYX3 AC093525.8-201ENST00000624099 1342 ntBASIC14.38□□□□□ -0.11
CCDC116Q8IYX3 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC116Q8IYX3 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.38□□□□□ -0.11
CCDC116Q8IYX3 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC116Q8IYX3 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC116Q8IYX3 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC116Q8IYX3 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC116Q8IYX3 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
CCDC116Q8IYX3 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC116Q8IYX3 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC116Q8IYX3 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC116Q8IYX3 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC116Q8IYX3 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC116Q8IYX3 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC116Q8IYX3 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC116Q8IYX3 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC116Q8IYX3 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC116Q8IYX3 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CCDC116Q8IYX3 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC116Q8IYX3 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC116Q8IYX3 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.37□□□□□ -0.11
CCDC116Q8IYX3 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CCDC116Q8IYX3 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC116Q8IYX3 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC116Q8IYX3 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC116Q8IYX3 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC116Q8IYX3 C1QBPP1-201ENST00000400117 770 ntBASIC14.37□□□□□ -0.11
CCDC116Q8IYX3 PIN1P1-201ENST00000412108 996 ntBASIC14.37□□□□□ -0.11
CCDC116Q8IYX3 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.37□□□□□ -0.11
CCDC116Q8IYX3 AL442647.2-201ENST00000429864 857 ntBASIC14.37□□□□□ -0.11
CCDC116Q8IYX3 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.37□□□□□ -0.11
CCDC116Q8IYX3 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.37□□□□□ -0.11
CCDC116Q8IYX3 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.37□□□□□ -0.11
CCDC116Q8IYX3 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms