Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC16.1■□□□□ 0.17
NPAS4Q8IUM7 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC16.1■□□□□ 0.17
NPAS4Q8IUM7 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
NPAS4Q8IUM7 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
NPAS4Q8IUM7 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
NPAS4Q8IUM7 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC16.1■□□□□ 0.17
NPAS4Q8IUM7 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NPAS4Q8IUM7 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NPAS4Q8IUM7 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NPAS4Q8IUM7 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NPAS4Q8IUM7 AC003102.2-201ENST00000589195 1469 ntBASIC16.1■□□□□ 0.17
NPAS4Q8IUM7 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
NPAS4Q8IUM7 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.09■□□□□ 0.17
NPAS4Q8IUM7 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
NPAS4Q8IUM7 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NPAS4Q8IUM7 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NPAS4Q8IUM7 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
NPAS4Q8IUM7 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NPAS4Q8IUM7 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
NPAS4Q8IUM7 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
NPAS4Q8IUM7 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC16.09■□□□□ 0.17
NPAS4Q8IUM7 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.09■□□□□ 0.17
NPAS4Q8IUM7 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NPAS4Q8IUM7 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NPAS4Q8IUM7 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.09■□□□□ 0.17
NPAS4Q8IUM7 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NPAS4Q8IUM7 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC16.09■□□□□ 0.17
NPAS4Q8IUM7 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC16.09■□□□□ 0.17
NPAS4Q8IUM7 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NPAS4Q8IUM7 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC16.09■□□□□ 0.17
NPAS4Q8IUM7 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC16.09■□□□□ 0.17
NPAS4Q8IUM7 MIR4754-201ENST00000582477 89 ntBASIC16.09■□□□□ 0.17
NPAS4Q8IUM7 AC005962.1-201ENST00000584100 773 ntBASIC16.09■□□□□ 0.17
NPAS4Q8IUM7 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC16.09■□□□□ 0.17
NPAS4Q8IUM7 MIR7845-201ENST00000618396 99 ntBASIC16.09■□□□□ 0.17
NPAS4Q8IUM7 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
NPAS4Q8IUM7 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NPAS4Q8IUM7 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC16.09■□□□□ 0.17
NPAS4Q8IUM7 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NPAS4Q8IUM7 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NPAS4Q8IUM7 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NPAS4Q8IUM7 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NPAS4Q8IUM7 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NPAS4Q8IUM7 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
NPAS4Q8IUM7 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NPAS4Q8IUM7 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC16.09■□□□□ 0.17
NPAS4Q8IUM7 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NPAS4Q8IUM7 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
NPAS4Q8IUM7 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
NPAS4Q8IUM7 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NPAS4Q8IUM7 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NPAS4Q8IUM7 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.09■□□□□ 0.17
NPAS4Q8IUM7 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NPAS4Q8IUM7 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
NPAS4Q8IUM7 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
NPAS4Q8IUM7 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC16.08■□□□□ 0.17
NPAS4Q8IUM7 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
NPAS4Q8IUM7 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
NPAS4Q8IUM7 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
NPAS4Q8IUM7 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NPAS4Q8IUM7 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NPAS4Q8IUM7 AC026691.1-201ENST00000602502 2017 ntBASIC16.08■□□□□ 0.16
NPAS4Q8IUM7 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NPAS4Q8IUM7 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NPAS4Q8IUM7 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NPAS4Q8IUM7 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NPAS4Q8IUM7 IGF1-203ENST00000392904 761 ntTSL 5 BASIC16.08■□□□□ 0.16
NPAS4Q8IUM7 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NPAS4Q8IUM7 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC16.08■□□□□ 0.16
NPAS4Q8IUM7 AC078875.1-201ENST00000431907 724 ntBASIC16.08■□□□□ 0.16
NPAS4Q8IUM7 AC069218.1-201ENST00000435269 762 ntBASIC16.08■□□□□ 0.16
NPAS4Q8IUM7 AC073150.1-201ENST00000450406 1084 ntBASIC16.08■□□□□ 0.16
NPAS4Q8IUM7 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NPAS4Q8IUM7 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC16.08■□□□□ 0.16
NPAS4Q8IUM7 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC16.08■□□□□ 0.16
NPAS4Q8IUM7 AC008267.1-201ENST00000474858 1069 ntBASIC16.08■□□□□ 0.16
NPAS4Q8IUM7 AC019193.1-201ENST00000506678 823 ntBASIC16.08■□□□□ 0.16
NPAS4Q8IUM7 IGLV3-15-201ENST00000518356 244 ntBASIC16.08■□□□□ 0.16
NPAS4Q8IUM7 CCNC-217ENST00000523985 958 ntTSL 2 BASIC16.08■□□□□ 0.16
NPAS4Q8IUM7 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC16.08■□□□□ 0.16
NPAS4Q8IUM7 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC16.08■□□□□ 0.16
NPAS4Q8IUM7 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NPAS4Q8IUM7 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
NPAS4Q8IUM7 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.08■□□□□ 0.16
NPAS4Q8IUM7 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NPAS4Q8IUM7 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NPAS4Q8IUM7 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
NPAS4Q8IUM7 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NPAS4Q8IUM7 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
NPAS4Q8IUM7 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NPAS4Q8IUM7 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
NPAS4Q8IUM7 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NPAS4Q8IUM7 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NPAS4Q8IUM7 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NPAS4Q8IUM7 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NPAS4Q8IUM7 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NPAS4Q8IUM7 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC16.08■□□□□ 0.16
NPAS4Q8IUM7 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NPAS4Q8IUM7 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NPAS4Q8IUM7 AL365203.3-201ENST00000609742 2057 ntBASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms