Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.29■□□□□ 0.04
LYSMD3Q7Z3D4 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
LYSMD3Q7Z3D4 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
LYSMD3Q7Z3D4 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.29■□□□□ 0.04
LYSMD3Q7Z3D4 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.29■□□□□ 0.04
LYSMD3Q7Z3D4 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LYSMD3Q7Z3D4 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LYSMD3Q7Z3D4 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LYSMD3Q7Z3D4 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
LYSMD3Q7Z3D4 ACKR1-201ENST00000368121 1240 ntBASIC15.29■□□□□ 0.04
LYSMD3Q7Z3D4 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
LYSMD3Q7Z3D4 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LYSMD3Q7Z3D4 AL139094.1-201ENST00000405549 1188 ntBASIC15.29■□□□□ 0.04
LYSMD3Q7Z3D4 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.29■□□□□ 0.04
LYSMD3Q7Z3D4 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.29■□□□□ 0.04
LYSMD3Q7Z3D4 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LYSMD3Q7Z3D4 KLF2P2-201ENST00000416807 1039 ntBASIC15.29■□□□□ 0.04
LYSMD3Q7Z3D4 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC15.29■□□□□ 0.04
LYSMD3Q7Z3D4 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LYSMD3Q7Z3D4 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
LYSMD3Q7Z3D4 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LYSMD3Q7Z3D4 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.29■□□□□ 0.04
LYSMD3Q7Z3D4 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
LYSMD3Q7Z3D4 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.29■□□□□ 0.04
LYSMD3Q7Z3D4 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC15.29■□□□□ 0.04
LYSMD3Q7Z3D4 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.29■□□□□ 0.04
LYSMD3Q7Z3D4 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.29■□□□□ 0.04
LYSMD3Q7Z3D4 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.29■□□□□ 0.04
LYSMD3Q7Z3D4 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.29■□□□□ 0.04
LYSMD3Q7Z3D4 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.29■□□□□ 0.04
LYSMD3Q7Z3D4 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LYSMD3Q7Z3D4 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.29■□□□□ 0.04
LYSMD3Q7Z3D4 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LYSMD3Q7Z3D4 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.29■□□□□ 0.04
LYSMD3Q7Z3D4 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LYSMD3Q7Z3D4 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LYSMD3Q7Z3D4 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
LYSMD3Q7Z3D4 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.29■□□□□ 0.04
LYSMD3Q7Z3D4 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.29■□□□□ 0.04
LYSMD3Q7Z3D4 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LYSMD3Q7Z3D4 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LYSMD3Q7Z3D4 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LYSMD3Q7Z3D4 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LYSMD3Q7Z3D4 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
LYSMD3Q7Z3D4 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LYSMD3Q7Z3D4 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LYSMD3Q7Z3D4 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LYSMD3Q7Z3D4 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.28■□□□□ 0.04
LYSMD3Q7Z3D4 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.28■□□□□ 0.04
LYSMD3Q7Z3D4 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LYSMD3Q7Z3D4 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.28■□□□□ 0.04
LYSMD3Q7Z3D4 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
LYSMD3Q7Z3D4 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.28■□□□□ 0.04
LYSMD3Q7Z3D4 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LYSMD3Q7Z3D4 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LYSMD3Q7Z3D4 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
LYSMD3Q7Z3D4 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LYSMD3Q7Z3D4 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.28■□□□□ 0.04
LYSMD3Q7Z3D4 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LYSMD3Q7Z3D4 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.28■□□□□ 0.04
LYSMD3Q7Z3D4 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.28■□□□□ 0.04
LYSMD3Q7Z3D4 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
LYSMD3Q7Z3D4 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LYSMD3Q7Z3D4 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
LYSMD3Q7Z3D4 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
LYSMD3Q7Z3D4 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LYSMD3Q7Z3D4 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
LYSMD3Q7Z3D4 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LYSMD3Q7Z3D4 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LYSMD3Q7Z3D4 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LYSMD3Q7Z3D4 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.28■□□□□ 0.04
LYSMD3Q7Z3D4 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.28■□□□□ 0.04
LYSMD3Q7Z3D4 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.28■□□□□ 0.04
LYSMD3Q7Z3D4 AC022137.2-201ENST00000503482 481 ntBASIC15.28■□□□□ 0.04
LYSMD3Q7Z3D4 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC15.28■□□□□ 0.04
LYSMD3Q7Z3D4 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.28■□□□□ 0.04
LYSMD3Q7Z3D4 AC068587.3-201ENST00000526613 355 ntBASIC15.28■□□□□ 0.04
LYSMD3Q7Z3D4 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
LYSMD3Q7Z3D4 PTP4A1P2-201ENST00000546033 454 ntBASIC15.28■□□□□ 0.04
LYSMD3Q7Z3D4 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.28■□□□□ 0.04
LYSMD3Q7Z3D4 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
LYSMD3Q7Z3D4 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LYSMD3Q7Z3D4 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LYSMD3Q7Z3D4 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.28■□□□□ 0.04
LYSMD3Q7Z3D4 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.28■□□□□ 0.04
LYSMD3Q7Z3D4 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LYSMD3Q7Z3D4 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LYSMD3Q7Z3D4 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LYSMD3Q7Z3D4 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
LYSMD3Q7Z3D4 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.28■□□□□ 0.04
LYSMD3Q7Z3D4 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LYSMD3Q7Z3D4 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
LYSMD3Q7Z3D4 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LYSMD3Q7Z3D4 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.28■□□□□ 0.04
LYSMD3Q7Z3D4 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
LYSMD3Q7Z3D4 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
LYSMD3Q7Z3D4 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LYSMD3Q7Z3D4 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.04
LYSMD3Q7Z3D4 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
LYSMD3Q7Z3D4 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms