Protein–RNA interactions for Protein: Q71RC9

SMIM5, Small integral membrane protein 5, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM5Q71RC9 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMIM5Q71RC9 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC18.85■□□□□ 0.61
SMIM5Q71RC9 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMIM5Q71RC9 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMIM5Q71RC9 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMIM5Q71RC9 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SMIM5Q71RC9 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMIM5Q71RC9 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC18.85■□□□□ 0.61
SMIM5Q71RC9 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC18.85■□□□□ 0.61
SMIM5Q71RC9 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC18.85■□□□□ 0.61
SMIM5Q71RC9 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMIM5Q71RC9 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMIM5Q71RC9 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMIM5Q71RC9 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC18.84■□□□□ 0.61
SMIM5Q71RC9 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SMIM5Q71RC9 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMIM5Q71RC9 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC18.84■□□□□ 0.61
SMIM5Q71RC9 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC18.84■□□□□ 0.61
SMIM5Q71RC9 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SMIM5Q71RC9 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMIM5Q71RC9 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMIM5Q71RC9 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
SMIM5Q71RC9 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC18.84■□□□□ 0.61
SMIM5Q71RC9 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
SMIM5Q71RC9 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC18.84■□□□□ 0.61
SMIM5Q71RC9 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC18.84■□□□□ 0.61
SMIM5Q71RC9 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC18.84■□□□□ 0.61
SMIM5Q71RC9 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC18.84■□□□□ 0.61
SMIM5Q71RC9 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SMIM5Q71RC9 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC18.84■□□□□ 0.61
SMIM5Q71RC9 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC18.84■□□□□ 0.61
SMIM5Q71RC9 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC18.84■□□□□ 0.61
SMIM5Q71RC9 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC18.84■□□□□ 0.61
SMIM5Q71RC9 OR6D1P-202ENST00000641007 5290 ntBASIC18.84■□□□□ 0.61
SMIM5Q71RC9 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SMIM5Q71RC9 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMIM5Q71RC9 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMIM5Q71RC9 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMIM5Q71RC9 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
SMIM5Q71RC9 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMIM5Q71RC9 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SMIM5Q71RC9 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SMIM5Q71RC9 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC18.84■□□□□ 0.61
SMIM5Q71RC9 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMIM5Q71RC9 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SMIM5Q71RC9 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
SMIM5Q71RC9 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC18.83■□□□□ 0.61
SMIM5Q71RC9 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC18.83■□□□□ 0.61
SMIM5Q71RC9 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
SMIM5Q71RC9 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC18.83■□□□□ 0.61
SMIM5Q71RC9 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMIM5Q71RC9 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMIM5Q71RC9 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMIM5Q71RC9 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC18.83■□□□□ 0.6
SMIM5Q71RC9 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SMIM5Q71RC9 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMIM5Q71RC9 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC18.83■□□□□ 0.6
SMIM5Q71RC9 AL807761.2-201ENST00000422849 729 ntBASIC18.83■□□□□ 0.6
SMIM5Q71RC9 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
SMIM5Q71RC9 POLD4-208ENST00000532830 904 ntTSL 3 BASIC18.83■□□□□ 0.6
SMIM5Q71RC9 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC18.83■□□□□ 0.6
SMIM5Q71RC9 LINC00431-202ENST00000636375 159 ntBASIC18.83■□□□□ 0.6
SMIM5Q71RC9 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMIM5Q71RC9 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC18.83■□□□□ 0.6
SMIM5Q71RC9 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC18.83■□□□□ 0.6
SMIM5Q71RC9 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
SMIM5Q71RC9 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
SMIM5Q71RC9 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC18.83■□□□□ 0.6
SMIM5Q71RC9 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMIM5Q71RC9 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SMIM5Q71RC9 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMIM5Q71RC9 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMIM5Q71RC9 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
SMIM5Q71RC9 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SMIM5Q71RC9 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMIM5Q71RC9 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMIM5Q71RC9 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC18.82■□□□□ 0.6
SMIM5Q71RC9 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC18.82■□□□□ 0.6
SMIM5Q71RC9 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMIM5Q71RC9 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMIM5Q71RC9 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC18.82■□□□□ 0.6
SMIM5Q71RC9 MBP-201ENST00000354542 575 ntTSL 2 BASIC18.82■□□□□ 0.6
SMIM5Q71RC9 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC18.82■□□□□ 0.6
SMIM5Q71RC9 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SMIM5Q71RC9 HIST2H2BA-201ENST00000412169 381 ntBASIC18.82■□□□□ 0.6
SMIM5Q71RC9 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMIM5Q71RC9 AL592076.1-201ENST00000424448 303 ntBASIC18.82■□□□□ 0.6
SMIM5Q71RC9 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC18.82■□□□□ 0.6
SMIM5Q71RC9 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SMIM5Q71RC9 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC18.82■□□□□ 0.6
SMIM5Q71RC9 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC18.82■□□□□ 0.6
SMIM5Q71RC9 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC18.82■□□□□ 0.6
SMIM5Q71RC9 AL157792.1-201ENST00000488281 530 ntBASIC18.82■□□□□ 0.6
SMIM5Q71RC9 REEP5-205ENST00000504247 480 ntTSL 5 BASIC18.82■□□□□ 0.6
SMIM5Q71RC9 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC18.82■□□□□ 0.6
SMIM5Q71RC9 NEU3-207ENST00000534628 746 ntTSL 2 BASIC18.82■□□□□ 0.6
SMIM5Q71RC9 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC18.82■□□□□ 0.6
SMIM5Q71RC9 AC027601.3-201ENST00000622907 509 ntBASIC18.82■□□□□ 0.6
SMIM5Q71RC9 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC18.82■□□□□ 0.6
SMIM5Q71RC9 API5-202ENST00000420461 2009 ntTSL 2 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms