Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
H3F3CQ6NXT2 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
H3F3CQ6NXT2 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
H3F3CQ6NXT2 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
H3F3CQ6NXT2 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.07□□□□□ -0.16
H3F3CQ6NXT2 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
H3F3CQ6NXT2 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
H3F3CQ6NXT2 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
H3F3CQ6NXT2 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
H3F3CQ6NXT2 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
H3F3CQ6NXT2 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
H3F3CQ6NXT2 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.06□□□□□ -0.16
H3F3CQ6NXT2 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.06□□□□□ -0.16
H3F3CQ6NXT2 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
H3F3CQ6NXT2 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
H3F3CQ6NXT2 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
H3F3CQ6NXT2 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
H3F3CQ6NXT2 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
H3F3CQ6NXT2 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
H3F3CQ6NXT2 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
H3F3CQ6NXT2 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC14.06□□□□□ -0.16
H3F3CQ6NXT2 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
H3F3CQ6NXT2 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
H3F3CQ6NXT2 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
H3F3CQ6NXT2 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
H3F3CQ6NXT2 MPV17-205ENST00000402310 906 ntTSL 5 BASIC14.06□□□□□ -0.16
H3F3CQ6NXT2 MIR1202-201ENST00000408529 83 ntBASIC14.06□□□□□ -0.16
H3F3CQ6NXT2 HLA-K-203ENST00000430151 1046 ntBASIC14.06□□□□□ -0.16
H3F3CQ6NXT2 AL590640.2-201ENST00000457038 527 ntBASIC14.06□□□□□ -0.16
H3F3CQ6NXT2 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC14.06□□□□□ -0.16
H3F3CQ6NXT2 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.06□□□□□ -0.16
H3F3CQ6NXT2 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
H3F3CQ6NXT2 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC14.06□□□□□ -0.16
H3F3CQ6NXT2 RN7SL560P-201ENST00000577943 264 ntBASIC14.06□□□□□ -0.16
H3F3CQ6NXT2 MIR4538-201ENST00000581377 78 ntBASIC14.06□□□□□ -0.16
H3F3CQ6NXT2 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC14.06□□□□□ -0.16
H3F3CQ6NXT2 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.06□□□□□ -0.16
H3F3CQ6NXT2 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC14.06□□□□□ -0.16
H3F3CQ6NXT2 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
H3F3CQ6NXT2 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
H3F3CQ6NXT2 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
H3F3CQ6NXT2 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
H3F3CQ6NXT2 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
H3F3CQ6NXT2 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
H3F3CQ6NXT2 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
H3F3CQ6NXT2 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
H3F3CQ6NXT2 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.06□□□□□ -0.16
H3F3CQ6NXT2 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
H3F3CQ6NXT2 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
H3F3CQ6NXT2 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
H3F3CQ6NXT2 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
H3F3CQ6NXT2 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
H3F3CQ6NXT2 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.05□□□□□ -0.16
H3F3CQ6NXT2 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.05□□□□□ -0.16
H3F3CQ6NXT2 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
H3F3CQ6NXT2 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
H3F3CQ6NXT2 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
H3F3CQ6NXT2 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
H3F3CQ6NXT2 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
H3F3CQ6NXT2 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
H3F3CQ6NXT2 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
H3F3CQ6NXT2 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
H3F3CQ6NXT2 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
H3F3CQ6NXT2 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.05□□□□□ -0.16
H3F3CQ6NXT2 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
H3F3CQ6NXT2 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
H3F3CQ6NXT2 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
H3F3CQ6NXT2 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
H3F3CQ6NXT2 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.05□□□□□ -0.16
H3F3CQ6NXT2 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
H3F3CQ6NXT2 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
H3F3CQ6NXT2 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
H3F3CQ6NXT2 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
H3F3CQ6NXT2 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
H3F3CQ6NXT2 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
H3F3CQ6NXT2 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC14.05□□□□□ -0.16
H3F3CQ6NXT2 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
H3F3CQ6NXT2 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
H3F3CQ6NXT2 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
H3F3CQ6NXT2 BRWD1P1-201ENST00000401091 371 ntBASIC14.05□□□□□ -0.16
H3F3CQ6NXT2 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC14.05□□□□□ -0.16
H3F3CQ6NXT2 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
H3F3CQ6NXT2 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.05□□□□□ -0.16
H3F3CQ6NXT2 AC245100.3-201ENST00000441281 285 ntBASIC14.05□□□□□ -0.16
H3F3CQ6NXT2 RPL13AP20-201ENST00000459725 609 ntBASIC14.05□□□□□ -0.16
H3F3CQ6NXT2 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC14.05□□□□□ -0.16
H3F3CQ6NXT2 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
H3F3CQ6NXT2 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
H3F3CQ6NXT2 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.05□□□□□ -0.16
H3F3CQ6NXT2 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC14.05□□□□□ -0.16
H3F3CQ6NXT2 AC009542.2-202ENST00000619004 1067 ntBASIC14.05□□□□□ -0.16
H3F3CQ6NXT2 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
H3F3CQ6NXT2 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
H3F3CQ6NXT2 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
H3F3CQ6NXT2 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
H3F3CQ6NXT2 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
H3F3CQ6NXT2 AC020658.6-201ENST00000623564 1870 ntBASIC14.05□□□□□ -0.16
H3F3CQ6NXT2 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
H3F3CQ6NXT2 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC14.05□□□□□ -0.16
H3F3CQ6NXT2 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms