Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
UBA52P62987 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
UBA52P62987 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.23□□□□□ -0.29
UBA52P62987 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
UBA52P62987 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
UBA52P62987 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
UBA52P62987 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
UBA52P62987 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
UBA52P62987 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.23□□□□□ -0.29
UBA52P62987 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
UBA52P62987 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
UBA52P62987 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
UBA52P62987 CU639417.3-201ENST00000624240 1404 ntBASIC13.22□□□□□ -0.29
UBA52P62987 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
UBA52P62987 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
UBA52P62987 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
UBA52P62987 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.22□□□□□ -0.29
UBA52P62987 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
UBA52P62987 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
UBA52P62987 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.22□□□□□ -0.29
UBA52P62987 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
UBA52P62987 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.22□□□□□ -0.29
UBA52P62987 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.22□□□□□ -0.29
UBA52P62987 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
UBA52P62987 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
UBA52P62987 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC13.22□□□□□ -0.29
UBA52P62987 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
UBA52P62987 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
UBA52P62987 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
UBA52P62987 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.22□□□□□ -0.29
UBA52P62987 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.22□□□□□ -0.29
UBA52P62987 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
UBA52P62987 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
UBA52P62987 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC13.22□□□□□ -0.29
UBA52P62987 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC13.22□□□□□ -0.29
UBA52P62987 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
UBA52P62987 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC13.22□□□□□ -0.29
UBA52P62987 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC13.22□□□□□ -0.29
UBA52P62987 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
UBA52P62987 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
UBA52P62987 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
UBA52P62987 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC13.22□□□□□ -0.29
UBA52P62987 STOM-203ENST00000538954 1257 ntTSL 5 BASIC13.22□□□□□ -0.29
UBA52P62987 NOP2-220ENST00000545915 630 ntTSL 2 BASIC13.22□□□□□ -0.29
UBA52P62987 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC13.22□□□□□ -0.29
UBA52P62987 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.22□□□□□ -0.29
UBA52P62987 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
UBA52P62987 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
UBA52P62987 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC13.22□□□□□ -0.29
UBA52P62987 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.22□□□□□ -0.29
UBA52P62987 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
UBA52P62987 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC13.22□□□□□ -0.29
UBA52P62987 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
UBA52P62987 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.22□□□□□ -0.29
UBA52P62987 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
UBA52P62987 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
UBA52P62987 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.22□□□□□ -0.29
UBA52P62987 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC13.22□□□□□ -0.29
UBA52P62987 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
UBA52P62987 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC13.22□□□□□ -0.29
UBA52P62987 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
UBA52P62987 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC13.22□□□□□ -0.29
UBA52P62987 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
UBA52P62987 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
UBA52P62987 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
UBA52P62987 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
UBA52P62987 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.22□□□□□ -0.29
UBA52P62987 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
UBA52P62987 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
UBA52P62987 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
UBA52P62987 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
UBA52P62987 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
UBA52P62987 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.22□□□□□ -0.29
UBA52P62987 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
UBA52P62987 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.22□□□□□ -0.29
UBA52P62987 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC13.22□□□□□ -0.29
UBA52P62987 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
UBA52P62987 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC13.22□□□□□ -0.29
UBA52P62987 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
UBA52P62987 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
UBA52P62987 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
UBA52P62987 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
UBA52P62987 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.21□□□□□ -0.29
UBA52P62987 CETN4P-206ENST00000642099 2168 ntBASIC13.21□□□□□ -0.29
UBA52P62987 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
UBA52P62987 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC13.21□□□□□ -0.29
UBA52P62987 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
UBA52P62987 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
UBA52P62987 AL928921.2-201ENST00000641325 2442 ntBASIC13.21□□□□□ -0.29
UBA52P62987 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
UBA52P62987 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.21□□□□□ -0.29
UBA52P62987 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
UBA52P62987 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
UBA52P62987 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.21□□□□□ -0.29
UBA52P62987 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
UBA52P62987 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
UBA52P62987 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
UBA52P62987 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
UBA52P62987 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
UBA52P62987 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms