Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VSX2P58304 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VSX2P58304 AC138035.3-201ENST00000622706 2791 ntBASIC14.58□□□□□ -0.08
VSX2P58304 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
VSX2P58304 REXO1L4P-201ENST00000605109 1937 ntBASIC14.58□□□□□ -0.08
VSX2P58304 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
VSX2P58304 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VSX2P58304 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
VSX2P58304 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
VSX2P58304 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
VSX2P58304 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VSX2P58304 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VSX2P58304 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VSX2P58304 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.58□□□□□ -0.08
VSX2P58304 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VSX2P58304 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.58□□□□□ -0.08
VSX2P58304 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.58□□□□□ -0.08
VSX2P58304 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VSX2P58304 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VSX2P58304 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.57□□□□□ -0.08
VSX2P58304 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.57□□□□□ -0.08
VSX2P58304 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
VSX2P58304 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VSX2P58304 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC14.57□□□□□ -0.08
VSX2P58304 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
VSX2P58304 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
VSX2P58304 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
VSX2P58304 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VSX2P58304 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
VSX2P58304 PDIA3P1-201ENST00000471856 1510 ntBASIC14.57□□□□□ -0.08
VSX2P58304 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.57□□□□□ -0.08
VSX2P58304 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC14.57□□□□□ -0.08
VSX2P58304 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
VSX2P58304 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VSX2P58304 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
VSX2P58304 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
VSX2P58304 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
VSX2P58304 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
VSX2P58304 AL157414.3-201ENST00000624276 1954 ntBASIC14.57□□□□□ -0.08
VSX2P58304 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.57□□□□□ -0.08
VSX2P58304 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VSX2P58304 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
VSX2P58304 ZBTB12BP-201ENST00000314232 1122 ntBASIC14.57□□□□□ -0.08
VSX2P58304 MIR658-201ENST00000385210 100 ntBASIC14.57□□□□□ -0.08
VSX2P58304 ACTBP8-201ENST00000403258 1108 ntBASIC14.57□□□□□ -0.08
VSX2P58304 BOLA2P3-201ENST00000404566 256 ntBASIC14.57□□□□□ -0.08
VSX2P58304 MIR1909-201ENST00000411312 80 ntBASIC14.57□□□□□ -0.08
VSX2P58304 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
VSX2P58304 C2orf27AP3-201ENST00000434123 579 ntBASIC14.57□□□□□ -0.08
VSX2P58304 AC016694.1-201ENST00000434179 700 ntBASIC14.57□□□□□ -0.08
VSX2P58304 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VSX2P58304 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
VSX2P58304 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.57□□□□□ -0.08
VSX2P58304 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
VSX2P58304 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.57□□□□□ -0.08
VSX2P58304 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC14.57□□□□□ -0.08
VSX2P58304 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
VSX2P58304 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
VSX2P58304 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC14.57□□□□□ -0.08
VSX2P58304 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
VSX2P58304 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC14.57□□□□□ -0.08
VSX2P58304 AC244669.2-201ENST00000612320 853 ntBASIC14.57□□□□□ -0.08
VSX2P58304 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC14.57□□□□□ -0.08
VSX2P58304 AL354718.3-201ENST00000616414 581 ntBASIC14.57□□□□□ -0.08
VSX2P58304 CR382287.1-201ENST00000623954 586 ntBASIC14.57□□□□□ -0.08
VSX2P58304 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC14.57□□□□□ -0.08
VSX2P58304 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.57□□□□□ -0.08
VSX2P58304 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VSX2P58304 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.57□□□□□ -0.08
VSX2P58304 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VSX2P58304 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.57□□□□□ -0.08
VSX2P58304 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
VSX2P58304 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VSX2P58304 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VSX2P58304 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VSX2P58304 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
VSX2P58304 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.57□□□□□ -0.08
VSX2P58304 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
VSX2P58304 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VSX2P58304 TNRC18P2-201ENST00000417666 2714 ntBASIC14.57□□□□□ -0.08
VSX2P58304 AC012508.2-201ENST00000567613 1472 ntBASIC14.57□□□□□ -0.08
VSX2P58304 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.57□□□□□ -0.08
VSX2P58304 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
VSX2P58304 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.56□□□□□ -0.08
VSX2P58304 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VSX2P58304 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
VSX2P58304 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VSX2P58304 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VSX2P58304 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VSX2P58304 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
VSX2P58304 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.56□□□□□ -0.08
VSX2P58304 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
VSX2P58304 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.56□□□□□ -0.08
VSX2P58304 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VSX2P58304 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.56□□□□□ -0.08
VSX2P58304 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VSX2P58304 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VSX2P58304 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VSX2P58304 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
VSX2P58304 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms