Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC14.95□□□□□ -0.02
CLDN2P57739 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC14.95□□□□□ -0.02
CLDN2P57739 ZACNP1-201ENST00000612259 710 ntBASIC14.95□□□□□ -0.02
CLDN2P57739 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC14.95□□□□□ -0.02
CLDN2P57739 AP001002.3-201ENST00000623482 206 ntBASIC14.95□□□□□ -0.02
CLDN2P57739 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
CLDN2P57739 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLDN2P57739 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLDN2P57739 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CLDN2P57739 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLDN2P57739 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CLDN2P57739 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLDN2P57739 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.95□□□□□ -0.02
CLDN2P57739 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLDN2P57739 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
CLDN2P57739 C18orf15-201ENST00000623680 2534 ntBASIC14.95□□□□□ -0.02
CLDN2P57739 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CLDN2P57739 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
CLDN2P57739 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.95□□□□□ -0.02
CLDN2P57739 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.95□□□□□ -0.02
CLDN2P57739 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN2P57739 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
CLDN2P57739 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN2P57739 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.94□□□□□ -0.02
CLDN2P57739 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN2P57739 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN2P57739 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN2P57739 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN2P57739 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN2P57739 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN2P57739 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.94□□□□□ -0.02
CLDN2P57739 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN2P57739 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC14.94□□□□□ -0.02
CLDN2P57739 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.94□□□□□ -0.02
CLDN2P57739 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.94□□□□□ -0.02
CLDN2P57739 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CLDN2P57739 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN2P57739 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN2P57739 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN2P57739 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN2P57739 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN2P57739 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
CLDN2P57739 HNRNPA1P32-201ENST00000396326 963 ntBASIC14.94□□□□□ -0.02
CLDN2P57739 HNRNPA1P63-201ENST00000427917 963 ntBASIC14.94□□□□□ -0.02
CLDN2P57739 PTPA-218ENST00000435132 618 ntTSL 2 BASIC14.94□□□□□ -0.02
CLDN2P57739 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC14.94□□□□□ -0.02
CLDN2P57739 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC14.94□□□□□ -0.02
CLDN2P57739 TPI1-206ENST00000488464 791 ntTSL 5 BASIC14.94□□□□□ -0.02
CLDN2P57739 MESTP3-201ENST00000503460 968 ntBASIC14.94□□□□□ -0.02
CLDN2P57739 AC100850.1-201ENST00000506768 649 ntBASIC14.94□□□□□ -0.02
CLDN2P57739 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.94□□□□□ -0.02
CLDN2P57739 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC14.94□□□□□ -0.02
CLDN2P57739 IGHV3OR16-16-201ENST00000563644 343 ntBASIC14.94□□□□□ -0.02
CLDN2P57739 MIR4683-201ENST00000579659 81 ntBASIC14.94□□□□□ -0.02
CLDN2P57739 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC14.94□□□□□ -0.02
CLDN2P57739 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC14.94□□□□□ -0.02
CLDN2P57739 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC14.94□□□□□ -0.02
CLDN2P57739 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.94□□□□□ -0.02
CLDN2P57739 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.94□□□□□ -0.02
CLDN2P57739 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN2P57739 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN2P57739 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC14.94□□□□□ -0.02
CLDN2P57739 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN2P57739 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN2P57739 AC012508.2-201ENST00000567613 1472 ntBASIC14.94□□□□□ -0.02
CLDN2P57739 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.94□□□□□ -0.02
CLDN2P57739 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CLDN2P57739 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN2P57739 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
CLDN2P57739 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.94□□□□□ -0.02
CLDN2P57739 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN2P57739 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN2P57739 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN2P57739 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN2P57739 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN2P57739 INE2-201ENST00000630399 1874 ntBASIC14.93□□□□□ -0.02
CLDN2P57739 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.93□□□□□ -0.02
CLDN2P57739 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN2P57739 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN2P57739 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN2P57739 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN2P57739 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN2P57739 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.93□□□□□ -0.02
CLDN2P57739 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CLDN2P57739 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN2P57739 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN2P57739 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN2P57739 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN2P57739 CHMP1AP1-201ENST00000445563 662 ntBASIC14.93□□□□□ -0.02
CLDN2P57739 AC004898.1-201ENST00000451057 766 ntBASIC14.93□□□□□ -0.02
CLDN2P57739 APOA2-204ENST00000464492 530 ntTSL 3 BASIC14.93□□□□□ -0.02
CLDN2P57739 ARTN-209ENST00000479128 471 ntTSL 3 BASIC14.93□□□□□ -0.02
CLDN2P57739 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC14.93□□□□□ -0.02
CLDN2P57739 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN2P57739 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
CLDN2P57739 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.93□□□□□ -0.02
CLDN2P57739 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC14.93□□□□□ -0.02
CLDN2P57739 AL451050.2-201ENST00000606967 682 ntBASIC14.93□□□□□ -0.02
CLDN2P57739 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.93□□□□□ -0.02
CLDN2P57739 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms