Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.73□□□□□ -0.21
SUMO3P55854 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.73□□□□□ -0.21
SUMO3P55854 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.73□□□□□ -0.21
SUMO3P55854 AC106760.1-201ENST00000508690 800 ntBASIC13.73□□□□□ -0.21
SUMO3P55854 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC13.73□□□□□ -0.21
SUMO3P55854 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.73□□□□□ -0.21
SUMO3P55854 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SUMO3P55854 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.73□□□□□ -0.21
SUMO3P55854 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SUMO3P55854 ENPP7P14-201ENST00000621765 1040 ntBASIC13.73□□□□□ -0.21
SUMO3P55854 AC132938.4-201ENST00000623835 848 ntBASIC13.73□□□□□ -0.21
SUMO3P55854 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC13.73□□□□□ -0.21
SUMO3P55854 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
SUMO3P55854 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
SUMO3P55854 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SUMO3P55854 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SUMO3P55854 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC13.73□□□□□ -0.21
SUMO3P55854 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SUMO3P55854 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SUMO3P55854 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SUMO3P55854 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.73□□□□□ -0.21
SUMO3P55854 AC023090.2-201ENST00000625182 2110 ntBASIC13.73□□□□□ -0.21
SUMO3P55854 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SUMO3P55854 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC13.73□□□□□ -0.21
SUMO3P55854 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.73□□□□□ -0.21
SUMO3P55854 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
SUMO3P55854 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
SUMO3P55854 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SUMO3P55854 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SUMO3P55854 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
SUMO3P55854 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SUMO3P55854 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SUMO3P55854 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SUMO3P55854 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
SUMO3P55854 AL138709.1-201ENST00000614840 1693 ntBASIC13.72□□□□□ -0.21
SUMO3P55854 OR2I1P-209ENST00000641730 5365 ntBASIC13.72□□□□□ -0.21
SUMO3P55854 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
SUMO3P55854 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.72□□□□□ -0.21
SUMO3P55854 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SUMO3P55854 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
SUMO3P55854 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SUMO3P55854 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SUMO3P55854 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
SUMO3P55854 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SUMO3P55854 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.72□□□□□ -0.21
SUMO3P55854 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SUMO3P55854 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
SUMO3P55854 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SUMO3P55854 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SUMO3P55854 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC13.72□□□□□ -0.21
SUMO3P55854 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC13.72□□□□□ -0.21
SUMO3P55854 GAPDHP21-201ENST00000450301 1010 ntBASIC13.72□□□□□ -0.21
SUMO3P55854 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.72□□□□□ -0.21
SUMO3P55854 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC13.72□□□□□ -0.21
SUMO3P55854 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.72□□□□□ -0.21
SUMO3P55854 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
SUMO3P55854 AC025279.2-201ENST00000569730 653 ntBASIC13.72□□□□□ -0.21
SUMO3P55854 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC13.72□□□□□ -0.21
SUMO3P55854 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SUMO3P55854 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.72□□□□□ -0.21
SUMO3P55854 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
SUMO3P55854 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SUMO3P55854 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
SUMO3P55854 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SUMO3P55854 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SUMO3P55854 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
SUMO3P55854 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SUMO3P55854 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
SUMO3P55854 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SUMO3P55854 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
SUMO3P55854 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
SUMO3P55854 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.72□□□□□ -0.21
SUMO3P55854 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
SUMO3P55854 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SUMO3P55854 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
SUMO3P55854 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC13.72□□□□□ -0.21
SUMO3P55854 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SUMO3P55854 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SUMO3P55854 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
SUMO3P55854 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SUMO3P55854 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
SUMO3P55854 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SUMO3P55854 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SUMO3P55854 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SUMO3P55854 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.71□□□□□ -0.21
SUMO3P55854 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
SUMO3P55854 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
SUMO3P55854 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
SUMO3P55854 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.71□□□□□ -0.21
SUMO3P55854 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
SUMO3P55854 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
SUMO3P55854 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SUMO3P55854 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SUMO3P55854 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SUMO3P55854 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
SUMO3P55854 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SUMO3P55854 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
SUMO3P55854 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC13.71□□□□□ -0.21
SUMO3P55854 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SUMO3P55854 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms