Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
APOC4P55056 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC11.13□□□□□ -0.63
APOC4P55056 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
APOC4P55056 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
APOC4P55056 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
APOC4P55056 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
APOC4P55056 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC11.13□□□□□ -0.63
APOC4P55056 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
APOC4P55056 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
APOC4P55056 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
APOC4P55056 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC11.13□□□□□ -0.63
APOC4P55056 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
APOC4P55056 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
APOC4P55056 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
APOC4P55056 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
APOC4P55056 ANKRD30BP2-201ENST00000435744 1610 ntBASIC11.13□□□□□ -0.63
APOC4P55056 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
APOC4P55056 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
APOC4P55056 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
APOC4P55056 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
APOC4P55056 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
APOC4P55056 STK33-217ENST00000534493 1895 ntTSL 2 BASIC11.12□□□□□ -0.63
APOC4P55056 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
APOC4P55056 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
APOC4P55056 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
APOC4P55056 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
APOC4P55056 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
APOC4P55056 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
APOC4P55056 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
APOC4P55056 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
APOC4P55056 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
APOC4P55056 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
APOC4P55056 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC11.12□□□□□ -0.63
APOC4P55056 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
APOC4P55056 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC11.12□□□□□ -0.63
APOC4P55056 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
APOC4P55056 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC11.12□□□□□ -0.63
APOC4P55056 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
APOC4P55056 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
APOC4P55056 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
APOC4P55056 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
APOC4P55056 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC11.12□□□□□ -0.63
APOC4P55056 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
APOC4P55056 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
APOC4P55056 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
APOC4P55056 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC11.12□□□□□ -0.63
APOC4P55056 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
APOC4P55056 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
APOC4P55056 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
APOC4P55056 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
APOC4P55056 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
APOC4P55056 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
APOC4P55056 TPO-206ENST00000382269 1155 ntTSL 5 BASIC11.12□□□□□ -0.63
APOC4P55056 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
APOC4P55056 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC11.12□□□□□ -0.63
APOC4P55056 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC11.12□□□□□ -0.63
APOC4P55056 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
APOC4P55056 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC11.12□□□□□ -0.63
APOC4P55056 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC11.12□□□□□ -0.63
APOC4P55056 FAM8A4P-201ENST00000435433 1213 ntBASIC11.12□□□□□ -0.63
APOC4P55056 HOMER2P2-201ENST00000451621 847 ntBASIC11.12□□□□□ -0.63
APOC4P55056 Z93015.1-201ENST00000451718 390 ntBASIC11.12□□□□□ -0.63
APOC4P55056 AL590640.2-201ENST00000457038 527 ntBASIC11.12□□□□□ -0.63
APOC4P55056 AC092658.1-201ENST00000505836 891 ntBASIC11.12□□□□□ -0.63
APOC4P55056 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC11.12□□□□□ -0.63
APOC4P55056 AL583810.1-201ENST00000553344 1045 ntBASIC11.12□□□□□ -0.63
APOC4P55056 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC11.12□□□□□ -0.63
APOC4P55056 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC11.12□□□□□ -0.63
APOC4P55056 DERL2-202ENST00000570848 657 ntTSL 5 BASIC11.12□□□□□ -0.63
APOC4P55056 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC11.12□□□□□ -0.63
APOC4P55056 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
APOC4P55056 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC11.12□□□□□ -0.63
APOC4P55056 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
APOC4P55056 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
APOC4P55056 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
APOC4P55056 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
APOC4P55056 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
APOC4P55056 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
APOC4P55056 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
APOC4P55056 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
APOC4P55056 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
APOC4P55056 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
APOC4P55056 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
APOC4P55056 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
APOC4P55056 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
APOC4P55056 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
APOC4P55056 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC11.12□□□□□ -0.63
APOC4P55056 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
APOC4P55056 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
APOC4P55056 AL360270.3-201ENST00000609118 1348 ntBASIC11.11□□□□□ -0.63
APOC4P55056 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
APOC4P55056 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
APOC4P55056 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC11.11□□□□□ -0.63
APOC4P55056 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC11.11□□□□□ -0.63
APOC4P55056 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
APOC4P55056 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
APOC4P55056 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
APOC4P55056 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
APOC4P55056 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC11.11□□□□□ -0.63
APOC4P55056 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms