Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
ATXN3P54252 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ATXN3P54252 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.63■□□□□ 0.09
ATXN3P54252 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.63■□□□□ 0.09
ATXN3P54252 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.63■□□□□ 0.09
ATXN3P54252 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
ATXN3P54252 KCP-203ENST00000610776 5108 ntTSL 5 BASIC15.63■□□□□ 0.09
ATXN3P54252 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
ATXN3P54252 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
ATXN3P54252 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
ATXN3P54252 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ATXN3P54252 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ATXN3P54252 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.63■□□□□ 0.09
ATXN3P54252 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.63■□□□□ 0.09
ATXN3P54252 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
ATXN3P54252 AC004987.2-201ENST00000395959 1148 ntBASIC15.63■□□□□ 0.09
ATXN3P54252 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.63■□□□□ 0.09
ATXN3P54252 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC15.63■□□□□ 0.09
ATXN3P54252 AC016694.1-201ENST00000434179 700 ntBASIC15.63■□□□□ 0.09
ATXN3P54252 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.63■□□□□ 0.09
ATXN3P54252 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC15.63■□□□□ 0.09
ATXN3P54252 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC15.63■□□□□ 0.09
ATXN3P54252 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC15.63■□□□□ 0.09
ATXN3P54252 AP001889.1-201ENST00000525414 633 ntBASIC15.63■□□□□ 0.09
ATXN3P54252 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.63■□□□□ 0.09
ATXN3P54252 AC243562.2-201ENST00000561247 970 ntBASIC15.63■□□□□ 0.09
ATXN3P54252 AC091271.1-201ENST00000611877 1162 ntBASIC15.63■□□□□ 0.09
ATXN3P54252 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.63■□□□□ 0.09
ATXN3P54252 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
ATXN3P54252 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ATXN3P54252 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.63■□□□□ 0.09
ATXN3P54252 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
ATXN3P54252 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ATXN3P54252 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ATXN3P54252 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC15.63■□□□□ 0.09
ATXN3P54252 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
ATXN3P54252 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ATXN3P54252 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
ATXN3P54252 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ATXN3P54252 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
ATXN3P54252 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
ATXN3P54252 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
ATXN3P54252 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
ATXN3P54252 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.62■□□□□ 0.09
ATXN3P54252 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
ATXN3P54252 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
ATXN3P54252 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.62■□□□□ 0.09
ATXN3P54252 AL109954.1-202ENST00000564051 2148 ntBASIC15.62■□□□□ 0.09
ATXN3P54252 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
ATXN3P54252 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.62■□□□□ 0.09
ATXN3P54252 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
ATXN3P54252 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ATXN3P54252 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
ATXN3P54252 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
ATXN3P54252 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.62■□□□□ 0.09
ATXN3P54252 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
ATXN3P54252 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.62■□□□□ 0.09
ATXN3P54252 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.62■□□□□ 0.09
ATXN3P54252 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.62■□□□□ 0.09
ATXN3P54252 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
ATXN3P54252 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
ATXN3P54252 C1QBPP1-201ENST00000400117 770 ntBASIC15.62■□□□□ 0.09
ATXN3P54252 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
ATXN3P54252 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ATXN3P54252 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC15.62■□□□□ 0.09
ATXN3P54252 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.62■□□□□ 0.09
ATXN3P54252 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15.62■□□□□ 0.09
ATXN3P54252 BRI3BPP1-201ENST00000594224 787 ntBASIC15.62■□□□□ 0.09
ATXN3P54252 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.62■□□□□ 0.09
ATXN3P54252 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
ATXN3P54252 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC15.62■□□□□ 0.09
ATXN3P54252 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.62■□□□□ 0.09
ATXN3P54252 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
ATXN3P54252 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC15.62■□□□□ 0.09
ATXN3P54252 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
ATXN3P54252 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.62■□□□□ 0.09
ATXN3P54252 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
ATXN3P54252 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.62■□□□□ 0.09
ATXN3P54252 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ATXN3P54252 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ATXN3P54252 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ATXN3P54252 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.62■□□□□ 0.09
ATXN3P54252 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
ATXN3P54252 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
ATXN3P54252 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
ATXN3P54252 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ATXN3P54252 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.62■□□□□ 0.09
ATXN3P54252 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.62■□□□□ 0.09
ATXN3P54252 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ATXN3P54252 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.62■□□□□ 0.09
ATXN3P54252 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
ATXN3P54252 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.61■□□□□ 0.09
ATXN3P54252 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.61■□□□□ 0.09
ATXN3P54252 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.61■□□□□ 0.09
ATXN3P54252 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ATXN3P54252 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.61■□□□□ 0.09
ATXN3P54252 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ATXN3P54252 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
ATXN3P54252 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
ATXN3P54252 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms