Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
USP11P51784 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
USP11P51784 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
USP11P51784 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC17.1■□□□□ 0.33
USP11P51784 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP11P51784 AC068418.2-201ENST00000577309 3703 ntBASIC17.1■□□□□ 0.33
USP11P51784 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP11P51784 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP11P51784 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP11P51784 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
USP11P51784 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP11P51784 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
USP11P51784 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC17.1■□□□□ 0.33
USP11P51784 STX1A-203ENST00000395155 783 ntTSL 2 BASIC17.1■□□□□ 0.33
USP11P51784 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP11P51784 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
USP11P51784 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
USP11P51784 AC026954.1-201ENST00000429771 1293 ntBASIC17.1■□□□□ 0.33
USP11P51784 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC17.1■□□□□ 0.33
USP11P51784 CSF2RBP1-201ENST00000447905 391 ntBASIC17.1■□□□□ 0.33
USP11P51784 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC17.1■□□□□ 0.33
USP11P51784 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
USP11P51784 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC17.1■□□□□ 0.33
USP11P51784 AL359881.2-201ENST00000602973 570 ntBASIC17.1■□□□□ 0.33
USP11P51784 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC17.1■□□□□ 0.33
USP11P51784 AHCYP2-201ENST00000430630 1300 ntBASIC17.1■□□□□ 0.33
USP11P51784 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
USP11P51784 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP11P51784 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC17.1■□□□□ 0.33
USP11P51784 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP11P51784 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
USP11P51784 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP11P51784 ANKRD30BP2-201ENST00000435744 1610 ntBASIC17.1■□□□□ 0.33
USP11P51784 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC17.1■□□□□ 0.33
USP11P51784 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP11P51784 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP11P51784 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC17.1■□□□□ 0.33
USP11P51784 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP11P51784 GPI-205ENST00000586425 1799 ntTSL 5 BASIC17.1■□□□□ 0.33
USP11P51784 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC17.1■□□□□ 0.33
USP11P51784 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP11P51784 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
USP11P51784 AJ011931.1-201ENST00000618749 2492 ntBASIC17.09■□□□□ 0.33
USP11P51784 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP11P51784 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP11P51784 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP11P51784 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP11P51784 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP11P51784 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
USP11P51784 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC17.09■□□□□ 0.33
USP11P51784 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
USP11P51784 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
USP11P51784 TLE1P1-201ENST00000422965 589 ntBASIC17.09■□□□□ 0.33
USP11P51784 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
USP11P51784 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
USP11P51784 KRT223P-202ENST00000449164 1292 ntBASIC17.09■□□□□ 0.33
USP11P51784 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC17.09■□□□□ 0.33
USP11P51784 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP11P51784 AC023310.1-201ENST00000554836 735 ntBASIC17.09■□□□□ 0.33
USP11P51784 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC17.09■□□□□ 0.33
USP11P51784 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
USP11P51784 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC17.09■□□□□ 0.33
USP11P51784 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC17.09■□□□□ 0.33
USP11P51784 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC17.09■□□□□ 0.33
USP11P51784 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC17.09■□□□□ 0.33
USP11P51784 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC17.09■□□□□ 0.33
USP11P51784 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC17.09■□□□□ 0.33
USP11P51784 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP11P51784 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC17.09■□□□□ 0.33
USP11P51784 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP11P51784 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC17.09■□□□□ 0.33
USP11P51784 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
USP11P51784 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC17.09■□□□□ 0.33
USP11P51784 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP11P51784 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
USP11P51784 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP11P51784 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP11P51784 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
USP11P51784 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP11P51784 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP11P51784 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP11P51784 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
USP11P51784 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
USP11P51784 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
USP11P51784 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
USP11P51784 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC17.08■□□□□ 0.33
USP11P51784 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
USP11P51784 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
USP11P51784 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
USP11P51784 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.33
USP11P51784 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC17.08■□□□□ 0.33
USP11P51784 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
USP11P51784 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
USP11P51784 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC17.08■□□□□ 0.32
USP11P51784 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC17.08■□□□□ 0.32
USP11P51784 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP11P51784 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
USP11P51784 AL138725.1-201ENST00000407347 1314 ntBASIC17.08■□□□□ 0.32
USP11P51784 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP11P51784 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms