Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC12.27□□□□□ -0.45
RAB5CP51148 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RAB5CP51148 AC106795.1-205ENST00000512851 1056 ntBASIC12.27□□□□□ -0.45
RAB5CP51148 AC022447.6-201ENST00000515522 438 ntBASIC12.27□□□□□ -0.45
RAB5CP51148 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RAB5CP51148 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC12.27□□□□□ -0.45
RAB5CP51148 AC066615.1-201ENST00000640911 628 ntBASIC12.27□□□□□ -0.45
RAB5CP51148 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.45
RAB5CP51148 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
RAB5CP51148 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
RAB5CP51148 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAB5CP51148 MEX3B-202ENST00000558133 4333 ntBASIC12.27□□□□□ -0.45
RAB5CP51148 CIC-204ENST00000572681 8218 ntTSL 5 BASIC12.27□□□□□ -0.45
RAB5CP51148 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAB5CP51148 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RAB5CP51148 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RAB5CP51148 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAB5CP51148 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RAB5CP51148 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAB5CP51148 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAB5CP51148 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
RAB5CP51148 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAB5CP51148 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAB5CP51148 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAB5CP51148 AC106818.1-201ENST00000623223 3242 ntBASIC12.27□□□□□ -0.45
RAB5CP51148 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.45
RAB5CP51148 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAB5CP51148 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAB5CP51148 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAB5CP51148 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAB5CP51148 GOLGA2P9-201ENST00000596977 1937 ntBASIC12.27□□□□□ -0.45
RAB5CP51148 KIAA1614-202ENST00000367588 9654 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RAB5CP51148 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RAB5CP51148 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAB5CP51148 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
RAB5CP51148 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC12.26□□□□□ -0.45
RAB5CP51148 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB5CP51148 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RAB5CP51148 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC12.26□□□□□ -0.45
RAB5CP51148 AC006504.4-201ENST00000592118 1568 ntBASIC12.26□□□□□ -0.45
RAB5CP51148 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB5CP51148 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RAB5CP51148 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
RAB5CP51148 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB5CP51148 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB5CP51148 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
RAB5CP51148 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB5CP51148 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RAB5CP51148 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
RAB5CP51148 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RAB5CP51148 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC12.26□□□□□ -0.45
RAB5CP51148 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB5CP51148 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC12.26□□□□□ -0.45
RAB5CP51148 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC12.26□□□□□ -0.45
RAB5CP51148 ELK2BP-201ENST00000415014 1224 ntBASIC12.26□□□□□ -0.45
RAB5CP51148 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC12.26□□□□□ -0.45
RAB5CP51148 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC12.26□□□□□ -0.45
RAB5CP51148 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC12.26□□□□□ -0.45
RAB5CP51148 AL031432.2-201ENST00000566714 459 ntBASIC12.26□□□□□ -0.45
RAB5CP51148 AL928711.1-201ENST00000570165 459 ntBASIC12.26□□□□□ -0.45
RAB5CP51148 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
RAB5CP51148 AL591684.3-201ENST00000605187 298 ntBASIC12.26□□□□□ -0.45
RAB5CP51148 AP001269.4-201ENST00000609611 512 ntBASIC12.26□□□□□ -0.45
RAB5CP51148 AL078644.1-201ENST00000609881 752 ntBASIC12.26□□□□□ -0.45
RAB5CP51148 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB5CP51148 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RAB5CP51148 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RAB5CP51148 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB5CP51148 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC12.26□□□□□ -0.45
RAB5CP51148 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB5CP51148 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB5CP51148 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC12.26□□□□□ -0.45
RAB5CP51148 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
RAB5CP51148 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
RAB5CP51148 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB5CP51148 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB5CP51148 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB5CP51148 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB5CP51148 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RAB5CP51148 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
RAB5CP51148 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC12.26□□□□□ -0.45
RAB5CP51148 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC12.26□□□□□ -0.45
RAB5CP51148 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC12.26□□□□□ -0.45
RAB5CP51148 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB5CP51148 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC12.26□□□□□ -0.45
RAB5CP51148 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC12.26□□□□□ -0.45
RAB5CP51148 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
RAB5CP51148 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC12.26□□□□□ -0.45
RAB5CP51148 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB5CP51148 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB5CP51148 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB5CP51148 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB5CP51148 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
RAB5CP51148 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB5CP51148 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB5CP51148 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB5CP51148 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB5CP51148 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RAB5CP51148 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
RAB5CP51148 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms