Protein–RNA interactions for Protein: P35908

KRT2, Keratin, type II cytoskeletal 2 epidermal, humanhuman

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT2P35908 EIF3FP3-201ENST00000434851 1086 ntBASIC17.4■□□□□ 0.38
KRT2P35908 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC17.4■□□□□ 0.38
KRT2P35908 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KRT2P35908 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC17.4■□□□□ 0.38
KRT2P35908 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
KRT2P35908 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC17.4■□□□□ 0.38
KRT2P35908 RPS15-202ENST00000585665 467 ntTSL 3 BASIC17.4■□□□□ 0.38
KRT2P35908 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC17.4■□□□□ 0.38
KRT2P35908 AC010319.3-201ENST00000597028 470 ntBASIC17.4■□□□□ 0.38
KRT2P35908 AC023090.2-201ENST00000625182 2110 ntBASIC17.4■□□□□ 0.38
KRT2P35908 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT2P35908 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT2P35908 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KRT2P35908 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT2P35908 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT2P35908 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC17.4■□□□□ 0.38
KRT2P35908 KRT8P35-201ENST00000483942 1338 ntBASIC17.4■□□□□ 0.38
KRT2P35908 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KRT2P35908 AC055811.4-201ENST00000624039 1754 ntBASIC17.4■□□□□ 0.38
KRT2P35908 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
KRT2P35908 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT2P35908 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC17.4■□□□□ 0.38
KRT2P35908 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC17.39■□□□□ 0.38
KRT2P35908 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
KRT2P35908 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
KRT2P35908 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
KRT2P35908 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT2P35908 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
KRT2P35908 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
KRT2P35908 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KRT2P35908 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT2P35908 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KRT2P35908 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT2P35908 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT2P35908 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT2P35908 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
KRT2P35908 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
KRT2P35908 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC17.39■□□□□ 0.37
KRT2P35908 RN7SL752P-201ENST00000463779 287 ntBASIC17.39■□□□□ 0.37
KRT2P35908 RN7SL692P-201ENST00000464677 288 ntBASIC17.39■□□□□ 0.37
KRT2P35908 GIMAP3P-201ENST00000495150 836 ntBASIC17.39■□□□□ 0.37
KRT2P35908 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KRT2P35908 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC17.39■□□□□ 0.37
KRT2P35908 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KRT2P35908 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC17.39■□□□□ 0.37
KRT2P35908 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KRT2P35908 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KRT2P35908 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT2P35908 AC018442.1-201ENST00000421439 2061 ntBASIC17.39■□□□□ 0.37
KRT2P35908 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT2P35908 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT2P35908 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC17.39■□□□□ 0.37
KRT2P35908 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
KRT2P35908 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT2P35908 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KRT2P35908 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KRT2P35908 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC17.39■□□□□ 0.37
KRT2P35908 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT2P35908 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRT2P35908 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRT2P35908 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC17.38■□□□□ 0.37
KRT2P35908 MSTO2P-201ENST00000314835 1709 ntBASIC17.38■□□□□ 0.37
KRT2P35908 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRT2P35908 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC17.38■□□□□ 0.37
KRT2P35908 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
KRT2P35908 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRT2P35908 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRT2P35908 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC17.38■□□□□ 0.37
KRT2P35908 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
KRT2P35908 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
KRT2P35908 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
KRT2P35908 AC018529.2-202ENST00000611482 3087 ntBASIC17.38■□□□□ 0.37
KRT2P35908 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.38■□□□□ 0.37
KRT2P35908 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRT2P35908 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
KRT2P35908 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRT2P35908 ACTG1P3-201ENST00000431775 1114 ntBASIC17.38■□□□□ 0.37
KRT2P35908 AC026434.2-201ENST00000506094 1078 ntBASIC17.38■□□□□ 0.37
KRT2P35908 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC17.38■□□□□ 0.37
KRT2P35908 NEU3-203ENST00000529024 581 ntTSL 3 BASIC17.38■□□□□ 0.37
KRT2P35908 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
KRT2P35908 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
KRT2P35908 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
KRT2P35908 MIR5189-201ENST00000577370 114 ntBASIC17.38■□□□□ 0.37
KRT2P35908 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
KRT2P35908 AL603764.1-201ENST00000636452 321 ntBASIC17.38■□□□□ 0.37
KRT2P35908 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
KRT2P35908 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
KRT2P35908 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRT2P35908 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
KRT2P35908 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
KRT2P35908 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRT2P35908 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRT2P35908 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
KRT2P35908 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRT2P35908 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC17.38■□□□□ 0.37
KRT2P35908 AL390755.1-201ENST00000623716 2027 ntBASIC17.38■□□□□ 0.37
KRT2P35908 AC126755.1-201ENST00000525846 6405 ntBASIC17.38■□□□□ 0.37
KRT2P35908 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
KRT2P35908 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms