Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LSP1P33241 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
LSP1P33241 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
LSP1P33241 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LSP1P33241 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
LSP1P33241 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LSP1P33241 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LSP1P33241 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LSP1P33241 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
LSP1P33241 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LSP1P33241 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
LSP1P33241 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LSP1P33241 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.29■□□□□ 0.04
LSP1P33241 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LSP1P33241 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15.29■□□□□ 0.04
LSP1P33241 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LSP1P33241 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC15.29■□□□□ 0.04
LSP1P33241 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LSP1P33241 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.29■□□□□ 0.04
LSP1P33241 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LSP1P33241 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.29■□□□□ 0.04
LSP1P33241 KRT126P-201ENST00000549467 1181 ntBASIC15.29■□□□□ 0.04
LSP1P33241 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
LSP1P33241 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.29■□□□□ 0.04
LSP1P33241 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.29■□□□□ 0.04
LSP1P33241 AC012313.10-201ENST00000623509 926 ntBASIC15.29■□□□□ 0.04
LSP1P33241 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC15.29■□□□□ 0.04
LSP1P33241 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LSP1P33241 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LSP1P33241 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LSP1P33241 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
LSP1P33241 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
LSP1P33241 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC15.29■□□□□ 0.04
LSP1P33241 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LSP1P33241 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
LSP1P33241 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LSP1P33241 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
LSP1P33241 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LSP1P33241 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC15.29■□□□□ 0.04
LSP1P33241 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC15.29■□□□□ 0.04
LSP1P33241 CETP-203ENST00000566128 1733 ntTSL 5 BASIC15.29■□□□□ 0.04
LSP1P33241 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC15.28■□□□□ 0.04
LSP1P33241 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
LSP1P33241 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
LSP1P33241 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC15.28■□□□□ 0.04
LSP1P33241 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LSP1P33241 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
LSP1P33241 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LSP1P33241 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LSP1P33241 FOXO1B-201ENST00000504678 1527 ntBASIC15.28■□□□□ 0.04
LSP1P33241 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC15.28■□□□□ 0.04
LSP1P33241 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LSP1P33241 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LSP1P33241 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
LSP1P33241 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.28■□□□□ 0.04
LSP1P33241 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.28■□□□□ 0.04
LSP1P33241 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
LSP1P33241 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LSP1P33241 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LSP1P33241 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
LSP1P33241 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
LSP1P33241 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LSP1P33241 AC004870.1-201ENST00000315132 882 ntBASIC15.28■□□□□ 0.04
LSP1P33241 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LSP1P33241 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
LSP1P33241 DFFB-203ENST00000341385 572 ntTSL 5 BASIC15.28■□□□□ 0.04
LSP1P33241 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC15.28■□□□□ 0.04
LSP1P33241 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.28■□□□□ 0.04
LSP1P33241 AC104457.1-201ENST00000401024 814 ntBASIC15.28■□□□□ 0.04
LSP1P33241 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.28■□□□□ 0.04
LSP1P33241 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LSP1P33241 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
LSP1P33241 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
LSP1P33241 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.28■□□□□ 0.04
LSP1P33241 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.28■□□□□ 0.04
LSP1P33241 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
LSP1P33241 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
LSP1P33241 AC073389.1-201ENST00000595595 795 ntBASIC15.28■□□□□ 0.04
LSP1P33241 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LSP1P33241 IFNL4P1-201ENST00000607083 540 ntBASIC15.28■□□□□ 0.04
LSP1P33241 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.28■□□□□ 0.04
LSP1P33241 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC15.28■□□□□ 0.04
LSP1P33241 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
LSP1P33241 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LSP1P33241 AC111170.3-201ENST00000624282 2464 ntBASIC15.28■□□□□ 0.04
LSP1P33241 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LSP1P33241 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC15.28■□□□□ 0.04
LSP1P33241 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
LSP1P33241 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC15.28■□□□□ 0.04
LSP1P33241 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC15.28■□□□□ 0.04
LSP1P33241 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.28■□□□□ 0.04
LSP1P33241 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
LSP1P33241 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
LSP1P33241 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
LSP1P33241 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.28■□□□□ 0.04
LSP1P33241 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LSP1P33241 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC15.27■□□□□ 0.04
LSP1P33241 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC15.27■□□□□ 0.04
LSP1P33241 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.27■□□□□ 0.04
LSP1P33241 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms