Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC20.83■□□□□ 0.93
CPS1P31327 AC023906.1-201ENST00000486386 453 ntBASIC20.83■□□□□ 0.93
CPS1P31327 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC20.83■□□□□ 0.93
CPS1P31327 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC20.83■□□□□ 0.93
CPS1P31327 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
CPS1P31327 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
CPS1P31327 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC20.83■□□□□ 0.93
CPS1P31327 VPS18-202ENST00000558474 873 ntTSL 3 BASIC20.83■□□□□ 0.93
CPS1P31327 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC20.83■□□□□ 0.93
CPS1P31327 MIR2392-201ENST00000584881 84 ntBASIC20.83■□□□□ 0.93
CPS1P31327 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
CPS1P31327 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CPS1P31327 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CPS1P31327 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CPS1P31327 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CPS1P31327 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CPS1P31327 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC20.83■□□□□ 0.93
CPS1P31327 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CPS1P31327 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
CPS1P31327 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CPS1P31327 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC20.83■□□□□ 0.93
CPS1P31327 CTBP2P8-201ENST00000422584 1330 ntBASIC20.83■□□□□ 0.92
CPS1P31327 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CPS1P31327 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CPS1P31327 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
CPS1P31327 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
CPS1P31327 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC20.83■□□□□ 0.92
CPS1P31327 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC20.83■□□□□ 0.92
CPS1P31327 DKFZP434H168-201ENST00000567381 1905 ntBASIC20.83■□□□□ 0.92
CPS1P31327 AP005117.1-202ENST00000581724 1908 ntBASIC20.83■□□□□ 0.92
CPS1P31327 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CPS1P31327 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CPS1P31327 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CPS1P31327 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CPS1P31327 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
CPS1P31327 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC20.83■□□□□ 0.92
CPS1P31327 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC20.83■□□□□ 0.92
CPS1P31327 PMEL-214ENST00000550447 901 ntTSL 3 BASIC20.83■□□□□ 0.92
CPS1P31327 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC20.83■□□□□ 0.92
CPS1P31327 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CPS1P31327 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC20.83■□□□□ 0.92
CPS1P31327 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC20.82■□□□□ 0.92
CPS1P31327 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CPS1P31327 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC20.82■□□□□ 0.92
CPS1P31327 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC20.82■□□□□ 0.92
CPS1P31327 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CPS1P31327 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CPS1P31327 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC20.82■□□□□ 0.92
CPS1P31327 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CPS1P31327 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CPS1P31327 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CPS1P31327 ZBED1P1-201ENST00000502364 1930 ntBASIC20.82■□□□□ 0.92
CPS1P31327 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CPS1P31327 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CPS1P31327 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC20.82■□□□□ 0.92
CPS1P31327 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CPS1P31327 AL590440.2-201ENST00000641973 1595 ntBASIC20.82■□□□□ 0.92
CPS1P31327 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
CPS1P31327 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC20.82■□□□□ 0.92
CPS1P31327 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC20.82■□□□□ 0.92
CPS1P31327 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC20.82■□□□□ 0.92
CPS1P31327 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC20.82■□□□□ 0.92
CPS1P31327 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC20.82■□□□□ 0.92
CPS1P31327 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC20.82■□□□□ 0.92
CPS1P31327 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CPS1P31327 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC20.82■□□□□ 0.92
CPS1P31327 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC20.82■□□□□ 0.92
CPS1P31327 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CPS1P31327 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CPS1P31327 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC20.81■□□□□ 0.92
CPS1P31327 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CPS1P31327 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC20.81■□□□□ 0.92
CPS1P31327 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
CPS1P31327 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CPS1P31327 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
CPS1P31327 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CPS1P31327 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CPS1P31327 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CPS1P31327 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CPS1P31327 AF274858.1-201ENST00000406288 372 ntBASIC20.81■□□□□ 0.92
CPS1P31327 MIR1301-201ENST00000408518 82 ntBASIC20.81■□□□□ 0.92
CPS1P31327 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC20.81■□□□□ 0.92
CPS1P31327 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC20.81■□□□□ 0.92
CPS1P31327 NME6-208ENST00000435684 599 ntTSL 2 BASIC20.81■□□□□ 0.92
CPS1P31327 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC20.81■□□□□ 0.92
CPS1P31327 HNRNPA1P42-201ENST00000458678 957 ntBASIC20.81■□□□□ 0.92
CPS1P31327 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC20.81■□□□□ 0.92
CPS1P31327 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC20.81■□□□□ 0.92
CPS1P31327 AC018846.1-201ENST00000568231 183 ntBASIC20.81■□□□□ 0.92
CPS1P31327 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC20.81■□□□□ 0.92
CPS1P31327 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CPS1P31327 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
CPS1P31327 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CPS1P31327 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CPS1P31327 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CPS1P31327 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC20.81■□□□□ 0.92
CPS1P31327 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CPS1P31327 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CPS1P31327 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CPS1P31327 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms