Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HOXC8P31273 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
HOXC8P31273 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HOXC8P31273 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC16.27■□□□□ 0.2
HOXC8P31273 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
HOXC8P31273 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
HOXC8P31273 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HOXC8P31273 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HOXC8P31273 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
HOXC8P31273 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HOXC8P31273 HCG11-201ENST00000411553 5696 ntBASIC16.27■□□□□ 0.2
HOXC8P31273 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.27■□□□□ 0.2
HOXC8P31273 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
HOXC8P31273 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
HOXC8P31273 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
HOXC8P31273 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC16.27■□□□□ 0.2
HOXC8P31273 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC16.27■□□□□ 0.2
HOXC8P31273 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC16.27■□□□□ 0.2
HOXC8P31273 LY6E-208ENST00000520531 490 ntTSL 2 BASIC16.27■□□□□ 0.2
HOXC8P31273 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
HOXC8P31273 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HOXC8P31273 AC026803.1-201ENST00000569130 274 ntBASIC16.27■□□□□ 0.2
HOXC8P31273 MIR5572-201ENST00000583188 137 ntBASIC16.27■□□□□ 0.2
HOXC8P31273 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC16.27■□□□□ 0.2
HOXC8P31273 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HOXC8P31273 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
HOXC8P31273 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.27■□□□□ 0.19
HOXC8P31273 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.27■□□□□ 0.19
HOXC8P31273 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HOXC8P31273 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
HOXC8P31273 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.19
HOXC8P31273 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
HOXC8P31273 TBC1D3J-201ENST00000620719 1426 ntBASIC16.27■□□□□ 0.19
HOXC8P31273 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
HOXC8P31273 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.19
HOXC8P31273 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HOXC8P31273 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HOXC8P31273 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HOXC8P31273 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HOXC8P31273 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
HOXC8P31273 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HOXC8P31273 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HOXC8P31273 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.26■□□□□ 0.19
HOXC8P31273 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HOXC8P31273 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
HOXC8P31273 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HOXC8P31273 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HOXC8P31273 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC16.26■□□□□ 0.19
HOXC8P31273 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HOXC8P31273 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HOXC8P31273 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HOXC8P31273 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC16.26■□□□□ 0.19
HOXC8P31273 AC253536.4-201ENST00000440539 267 ntBASIC16.26■□□□□ 0.19
HOXC8P31273 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC16.26■□□□□ 0.19
HOXC8P31273 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HOXC8P31273 AC003686.1-201ENST00000550956 1034 ntBASIC16.26■□□□□ 0.19
HOXC8P31273 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HOXC8P31273 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC16.26■□□□□ 0.19
HOXC8P31273 AC073352.2-201ENST00000609385 439 ntBASIC16.26■□□□□ 0.19
HOXC8P31273 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HOXC8P31273 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HOXC8P31273 F10-203ENST00000409306 1450 ntTSL 3 BASIC16.26■□□□□ 0.19
HOXC8P31273 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HOXC8P31273 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
HOXC8P31273 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.26■□□□□ 0.19
HOXC8P31273 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
HOXC8P31273 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HOXC8P31273 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.26■□□□□ 0.19
HOXC8P31273 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HOXC8P31273 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC16.26■□□□□ 0.19
HOXC8P31273 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HOXC8P31273 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HOXC8P31273 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HOXC8P31273 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HOXC8P31273 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HOXC8P31273 KRT8P28-201ENST00000433288 1390 ntBASIC16.26■□□□□ 0.19
HOXC8P31273 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.25■□□□□ 0.19
HOXC8P31273 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
HOXC8P31273 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HOXC8P31273 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
HOXC8P31273 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HOXC8P31273 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HOXC8P31273 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.25■□□□□ 0.19
HOXC8P31273 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HOXC8P31273 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
HOXC8P31273 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
HOXC8P31273 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC16.25■□□□□ 0.19
HOXC8P31273 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
HOXC8P31273 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HOXC8P31273 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HOXC8P31273 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
HOXC8P31273 OR2K2-202ENST00000374428 1038 ntBASIC16.25■□□□□ 0.19
HOXC8P31273 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC16.25■□□□□ 0.19
HOXC8P31273 IGF1-203ENST00000392904 761 ntTSL 5 BASIC16.25■□□□□ 0.19
HOXC8P31273 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HOXC8P31273 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HOXC8P31273 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC16.25■□□□□ 0.19
HOXC8P31273 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HOXC8P31273 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC16.25■□□□□ 0.19
HOXC8P31273 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms