Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
EPHA3P29320 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
EPHA3P29320 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
EPHA3P29320 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
EPHA3P29320 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
EPHA3P29320 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC14.84□□□□□ -0.03
EPHA3P29320 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.84□□□□□ -0.03
EPHA3P29320 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
EPHA3P29320 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
EPHA3P29320 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
EPHA3P29320 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
EPHA3P29320 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
EPHA3P29320 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
EPHA3P29320 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.83□□□□□ -0.04
EPHA3P29320 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.83□□□□□ -0.04
EPHA3P29320 AL121723.1-201ENST00000445194 1519 ntBASIC14.83□□□□□ -0.04
EPHA3P29320 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
EPHA3P29320 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
EPHA3P29320 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
EPHA3P29320 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
EPHA3P29320 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
EPHA3P29320 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.83□□□□□ -0.04
EPHA3P29320 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
EPHA3P29320 AC015922.1-201ENST00000421102 1152 ntBASIC14.83□□□□□ -0.04
EPHA3P29320 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.83□□□□□ -0.04
EPHA3P29320 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.83□□□□□ -0.04
EPHA3P29320 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.83□□□□□ -0.04
EPHA3P29320 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
EPHA3P29320 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.83□□□□□ -0.04
EPHA3P29320 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
EPHA3P29320 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.83□□□□□ -0.04
EPHA3P29320 PGAM5P1-201ENST00000518923 814 ntBASIC14.83□□□□□ -0.04
EPHA3P29320 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.83□□□□□ -0.04
EPHA3P29320 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.83□□□□□ -0.04
EPHA3P29320 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.83□□□□□ -0.04
EPHA3P29320 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.83□□□□□ -0.04
EPHA3P29320 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
EPHA3P29320 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.83□□□□□ -0.04
EPHA3P29320 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
EPHA3P29320 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
EPHA3P29320 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
EPHA3P29320 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
EPHA3P29320 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
EPHA3P29320 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
EPHA3P29320 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
EPHA3P29320 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
EPHA3P29320 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
EPHA3P29320 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.83□□□□□ -0.04
EPHA3P29320 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
EPHA3P29320 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
EPHA3P29320 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
EPHA3P29320 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
EPHA3P29320 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
EPHA3P29320 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
EPHA3P29320 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
EPHA3P29320 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.82□□□□□ -0.04
EPHA3P29320 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.82□□□□□ -0.04
EPHA3P29320 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
EPHA3P29320 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
EPHA3P29320 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.82□□□□□ -0.04
EPHA3P29320 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
EPHA3P29320 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
EPHA3P29320 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
EPHA3P29320 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
EPHA3P29320 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
EPHA3P29320 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
EPHA3P29320 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
EPHA3P29320 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
EPHA3P29320 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
EPHA3P29320 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.82□□□□□ -0.04
EPHA3P29320 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.82□□□□□ -0.04
EPHA3P29320 RPL13P2-201ENST00000440687 659 ntBASIC14.82□□□□□ -0.04
EPHA3P29320 KRT18P43-201ENST00000469825 1281 ntBASIC14.82□□□□□ -0.04
EPHA3P29320 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.82□□□□□ -0.04
EPHA3P29320 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.82□□□□□ -0.04
EPHA3P29320 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.82□□□□□ -0.04
EPHA3P29320 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.82□□□□□ -0.04
EPHA3P29320 AC026150.2-201ENST00000564693 1156 ntBASIC14.82□□□□□ -0.04
EPHA3P29320 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.82□□□□□ -0.04
EPHA3P29320 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.82□□□□□ -0.04
EPHA3P29320 MIR4453-201ENST00000584019 89 ntBASIC14.82□□□□□ -0.04
EPHA3P29320 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
EPHA3P29320 MTDHP5-201ENST00000598980 586 ntBASIC14.82□□□□□ -0.04
EPHA3P29320 LINC01115-203ENST00000606068 577 ntBASIC14.82□□□□□ -0.04
EPHA3P29320 AL513210.1-201ENST00000629608 234 ntBASIC14.82□□□□□ -0.04
EPHA3P29320 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.82□□□□□ -0.04
EPHA3P29320 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
EPHA3P29320 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
EPHA3P29320 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
EPHA3P29320 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
EPHA3P29320 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
EPHA3P29320 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
EPHA3P29320 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
EPHA3P29320 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.82□□□□□ -0.04
EPHA3P29320 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
EPHA3P29320 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
EPHA3P29320 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
EPHA3P29320 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
EPHA3P29320 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.82□□□□□ -0.04
EPHA3P29320 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms