Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CTGFP29279 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CTGFP29279 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.71■□□□□ 0.27
CTGFP29279 AC090616.6-203ENST00000579186 1945 ntBASIC16.71■□□□□ 0.27
CTGFP29279 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CTGFP29279 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CTGFP29279 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CTGFP29279 HNRNPA1P27-201ENST00000412087 955 ntBASIC16.71■□□□□ 0.27
CTGFP29279 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC16.71■□□□□ 0.27
CTGFP29279 KRT17P4-201ENST00000429445 819 ntBASIC16.71■□□□□ 0.27
CTGFP29279 DPY19L2P5-201ENST00000456300 331 ntBASIC16.71■□□□□ 0.27
CTGFP29279 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC16.71■□□□□ 0.27
CTGFP29279 AC012158.2-201ENST00000536546 354 ntBASIC16.71■□□□□ 0.27
CTGFP29279 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC16.71■□□□□ 0.27
CTGFP29279 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CTGFP29279 AL451007.2-201ENST00000632004 563 ntBASIC16.71■□□□□ 0.27
CTGFP29279 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CTGFP29279 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CTGFP29279 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CTGFP29279 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.71■□□□□ 0.27
CTGFP29279 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CTGFP29279 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
CTGFP29279 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC16.71■□□□□ 0.26
CTGFP29279 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CTGFP29279 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CTGFP29279 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.7■□□□□ 0.26
CTGFP29279 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CTGFP29279 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC16.7■□□□□ 0.26
CTGFP29279 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC16.7■□□□□ 0.26
CTGFP29279 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CTGFP29279 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
CTGFP29279 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CTGFP29279 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CTGFP29279 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.7■□□□□ 0.26
CTGFP29279 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CTGFP29279 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC16.7■□□□□ 0.26
CTGFP29279 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CTGFP29279 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CTGFP29279 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CTGFP29279 GUSBP10-201ENST00000417412 665 ntBASIC16.7■□□□□ 0.26
CTGFP29279 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CTGFP29279 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC16.7■□□□□ 0.26
CTGFP29279 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CTGFP29279 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC16.7■□□□□ 0.26
CTGFP29279 FAM86KP-201ENST00000509817 987 ntBASIC16.7■□□□□ 0.26
CTGFP29279 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.7■□□□□ 0.26
CTGFP29279 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC16.7■□□□□ 0.26
CTGFP29279 NAMA-206ENST00000605377 509 ntTSL 5 BASIC16.7■□□□□ 0.26
CTGFP29279 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CTGFP29279 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CTGFP29279 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CTGFP29279 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CTGFP29279 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CTGFP29279 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CTGFP29279 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CTGFP29279 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.7■□□□□ 0.26
CTGFP29279 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.7■□□□□ 0.26
CTGFP29279 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC16.7■□□□□ 0.26
CTGFP29279 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC16.7■□□□□ 0.26
CTGFP29279 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.7■□□□□ 0.26
CTGFP29279 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CTGFP29279 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CTGFP29279 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CTGFP29279 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
CTGFP29279 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC16.69■□□□□ 0.26
CTGFP29279 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CTGFP29279 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CTGFP29279 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CTGFP29279 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.69■□□□□ 0.26
CTGFP29279 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.69■□□□□ 0.26
CTGFP29279 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CTGFP29279 AC092850.2-201ENST00000623821 2697 ntBASIC16.69■□□□□ 0.26
CTGFP29279 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CTGFP29279 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC16.69■□□□□ 0.26
CTGFP29279 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.69■□□□□ 0.26
CTGFP29279 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CTGFP29279 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CTGFP29279 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CTGFP29279 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CTGFP29279 KRT17P5-201ENST00000332088 839 ntBASIC16.69■□□□□ 0.26
CTGFP29279 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CTGFP29279 GCSHP3-201ENST00000431120 391 ntBASIC16.69■□□□□ 0.26
CTGFP29279 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC16.69■□□□□ 0.26
CTGFP29279 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC16.69■□□□□ 0.26
CTGFP29279 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC16.69■□□□□ 0.26
CTGFP29279 DGAT2L7P-201ENST00000602462 744 ntBASIC16.69■□□□□ 0.26
CTGFP29279 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CTGFP29279 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CTGFP29279 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CTGFP29279 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CTGFP29279 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CTGFP29279 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CTGFP29279 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CTGFP29279 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.68■□□□□ 0.26
CTGFP29279 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC16.68■□□□□ 0.26
CTGFP29279 PRAL-201ENST00000624952 3286 ntBASIC16.68■□□□□ 0.26
CTGFP29279 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CTGFP29279 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC16.68■□□□□ 0.26
CTGFP29279 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CTGFP29279 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms