Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.78□□□□□ -0.2
GDF1P27539 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
GDF1P27539 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
GDF1P27539 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
GDF1P27539 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
GDF1P27539 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
GDF1P27539 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
GDF1P27539 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
GDF1P27539 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
GDF1P27539 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.77□□□□□ -0.21
GDF1P27539 AC006001.1-201ENST00000325130 474 ntBASIC13.77□□□□□ -0.21
GDF1P27539 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
GDF1P27539 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.77□□□□□ -0.21
GDF1P27539 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.77□□□□□ -0.21
GDF1P27539 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
GDF1P27539 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
GDF1P27539 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
GDF1P27539 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC13.77□□□□□ -0.21
GDF1P27539 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
GDF1P27539 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
GDF1P27539 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.77□□□□□ -0.21
GDF1P27539 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC13.77□□□□□ -0.21
GDF1P27539 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.77□□□□□ -0.21
GDF1P27539 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
GDF1P27539 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.77□□□□□ -0.21
GDF1P27539 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.77□□□□□ -0.21
GDF1P27539 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.77□□□□□ -0.21
GDF1P27539 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC13.77□□□□□ -0.21
GDF1P27539 AC245100.3-201ENST00000441281 285 ntBASIC13.77□□□□□ -0.21
GDF1P27539 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
GDF1P27539 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.77□□□□□ -0.21
GDF1P27539 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
GDF1P27539 RNA5SP412-201ENST00000516234 123 ntBASIC13.77□□□□□ -0.21
GDF1P27539 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC13.77□□□□□ -0.21
GDF1P27539 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.77□□□□□ -0.21
GDF1P27539 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
GDF1P27539 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
GDF1P27539 AC126365.1-201ENST00000578585 1514 ntBASIC13.77□□□□□ -0.21
GDF1P27539 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.77□□□□□ -0.21
GDF1P27539 AC006453.4-201ENST00000636949 1252 ntBASIC13.77□□□□□ -0.21
GDF1P27539 AC008687.7-202ENST00000637404 953 ntBASIC13.77□□□□□ -0.21
GDF1P27539 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
GDF1P27539 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
GDF1P27539 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
GDF1P27539 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
GDF1P27539 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
GDF1P27539 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
GDF1P27539 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC13.77□□□□□ -0.21
GDF1P27539 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
GDF1P27539 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
GDF1P27539 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC13.76□□□□□ -0.21
GDF1P27539 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC13.76□□□□□ -0.21
GDF1P27539 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GDF1P27539 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GDF1P27539 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
GDF1P27539 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
GDF1P27539 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GDF1P27539 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
GDF1P27539 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
GDF1P27539 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
GDF1P27539 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
GDF1P27539 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.76□□□□□ -0.21
GDF1P27539 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GDF1P27539 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.76□□□□□ -0.21
GDF1P27539 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
GDF1P27539 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
GDF1P27539 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.76□□□□□ -0.21
GDF1P27539 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GDF1P27539 KRT8P44-201ENST00000441609 1350 ntBASIC13.76□□□□□ -0.21
GDF1P27539 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
GDF1P27539 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
GDF1P27539 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GDF1P27539 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
GDF1P27539 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
GDF1P27539 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
GDF1P27539 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
GDF1P27539 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
GDF1P27539 BRWD1P1-201ENST00000401091 371 ntBASIC13.76□□□□□ -0.21
GDF1P27539 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.76□□□□□ -0.21
GDF1P27539 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC13.76□□□□□ -0.21
GDF1P27539 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC13.76□□□□□ -0.21
GDF1P27539 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC13.76□□□□□ -0.21
GDF1P27539 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC13.76□□□□□ -0.21
GDF1P27539 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC13.76□□□□□ -0.21
GDF1P27539 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
GDF1P27539 AC009542.2-202ENST00000619004 1067 ntBASIC13.76□□□□□ -0.21
GDF1P27539 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
GDF1P27539 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC13.76□□□□□ -0.21
GDF1P27539 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
GDF1P27539 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GDF1P27539 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
GDF1P27539 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GDF1P27539 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
GDF1P27539 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC13.76□□□□□ -0.21
GDF1P27539 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC13.76□□□□□ -0.21
GDF1P27539 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GDF1P27539 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
GDF1P27539 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC13.76□□□□□ -0.21
GDF1P27539 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GDF1P27539 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms