Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC16.52■□□□□ 0.243e-8■■□□□ 13.8
U2AF2P26368 ZNF330-208ENST00000515453 558 ntTSL 415.15■□□□□ 0.023e-8■■□□□ 13.8
U2AF2P26368 ZNF330-207ENST00000514826 733 ntTSL 213.07□□□□□ -0.323e-8■■□□□ 13.8
U2AF2P26368 STIL-205ENST00000413565 542 ntTSL 310.88□□□□□ -0.671e-15■■□□□ 13.8
U2AF2P26368 WAC-215ENST00000480474 1749 ntTSL 1 (best)3.59□□□□□ -1.836e-12■■□□□ 13.8
U2AF2P26368 AC098679.1-201ENST00000503611 2917 ntTSL 2 BASIC13.7□□□□□ -0.223e-7■■□□□ 13.8
U2AF2P26368 TRIM24-206ENST00000497516 1515 ntTSL 516.5■□□□□ 0.236e-8■■□□□ 13.8
U2AF2P26368 TFE3-203ENST00000487451 1058 ntTSL 318.14■□□□□ 0.491e-7■■□□□ 13.8
U2AF2P26368 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.391e-7■■□□□ 13.8
U2AF2P26368 TFE3-204ENST00000493583 3279 ntTSL 216.61■□□□□ 0.251e-7■■□□□ 13.8
U2AF2P26368 RAB17-207ENST00000416106 587 ntTSL 316.24■□□□□ 0.196e-15■■□□□ 13.8
U2AF2P26368 COBLL1-211ENST00000452626 772 ntTSL 52.72□□□□□ -1.978e-7■■□□□ 13.8
U2AF2P26368 RBM5-226ENST00000496179 1406 ntTSL 510.63□□□□□ -0.711e-6■■□□□ 13.8
U2AF2P26368 CHD2-218ENST00000629346 1249 ntTSL 5 BASIC13.09□□□□□ -0.315e-18■■□□□ 13.8
U2AF2P26368 CHD2-206ENST00000625990 888 ntTSL 59.79□□□□□ -0.845e-18■■□□□ 13.8
U2AF2P26368 CHD2-212ENST00000627622 1740 ntTSL 2 BASIC9.42□□□□□ -0.95e-18■■□□□ 13.8
U2AF2P26368 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.71e-6■■□□□ 13.8
U2AF2P26368 IDI1-205ENST00000491735 1066 ntTSL 1 (best)23.01■■□□□ 1.271e-6■■□□□ 13.8
U2AF2P26368 USP3-214ENST00000559718 757 ntTSL 212.8□□□□□ -0.362e-8■■□□□ 13.8
U2AF2P26368 USP3-220ENST00000561381 979 ntTSL 212.8□□□□□ -0.362e-8■■□□□ 13.8
U2AF2P26368 USP3-207ENST00000558218 717 ntTSL 311.27□□□□□ -0.612e-8■■□□□ 13.8
U2AF2P26368 PON2-209ENST00000471883 451 ntTSL 324.45■■□□□ 1.52e-6■■□□□ 13.8
U2AF2P26368 PON2-215ENST00000493469 579 ntTSL 219.34■□□□□ 0.692e-6■■□□□ 13.8
U2AF2P26368 PON2-206ENST00000460873 569 ntTSL 44.37□□□□□ -1.712e-6■■□□□ 13.8
U2AF2P26368 FASTK-213ENST00000482806 1826 ntTSL 526.04■■□□□ 1.765e-6■■□□□ 13.8
U2AF2P26368 FASTK-215ENST00000489884 1751 ntTSL 1 (best)25.21■■□□□ 1.635e-6■■□□□ 13.8
U2AF2P26368 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC24.88■■□□□ 1.575e-6■■□□□ 13.8
U2AF2P26368 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.385e-6■■□□□ 13.8
U2AF2P26368 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC23.54■■□□□ 1.365e-6■■□□□ 13.8
U2AF2P26368 FASTK-207ENST00000466855 1894 ntTSL 523.25■■□□□ 1.315e-6■■□□□ 13.8
U2AF2P26368 FASTK-209ENST00000469237 1904 ntTSL 521.06■□□□□ 0.965e-6■■□□□ 13.8
U2AF2P26368 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC20.71■□□□□ 0.915e-6■■□□□ 13.8
U2AF2P26368 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC20.38■□□□□ 0.855e-6■■□□□ 13.8
U2AF2P26368 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.555e-6■■□□□ 13.8
U2AF2P26368 FASTK-204ENST00000460980 1521 ntTSL 517.94■□□□□ 0.465e-6■■□□□ 13.8
U2AF2P26368 ACP2-207ENST00000529663 967 ntTSL 1 (best)17.8■□□□□ 0.445e-6■■□□□ 13.8
U2AF2P26368 FASTK-208ENST00000467237 3011 ntTSL 1 (best)17.2■□□□□ 0.345e-6■■□□□ 13.8
U2AF2P26368 LPIN1-213ENST00000464953 627 ntTSL 317.03■□□□□ 0.325e-6■■□□□ 13.8
U2AF2P26368 ACP2-210ENST00000531004 1457 ntTSL 216.92■□□□□ 0.35e-6■■□□□ 13.8
U2AF2P26368 ACP2-213ENST00000534448 2170 ntTSL 516.89■□□□□ 0.295e-6■■□□□ 13.8
U2AF2P26368 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.285e-6■■□□□ 13.8
U2AF2P26368 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC16.63■□□□□ 0.255e-6■■□□□ 13.8
U2AF2P26368 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC16.37■□□□□ 0.215e-6■■□□□ 13.8
U2AF2P26368 ACP2-211ENST00000531547 980 ntTSL 216.06■□□□□ 0.165e-6■■□□□ 13.8
U2AF2P26368 ACP2-203ENST00000524769 727 ntTSL 315.81■□□□□ 0.125e-6■■□□□ 13.8
U2AF2P26368 ERI2-208ENST00000564349 3657 ntTSL 2 BASIC14.76□□□□□ -0.055e-6■■□□□ 13.8
U2AF2P26368 DCUN1D3-202ENST00000563934 1996 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.095e-6■■□□□ 13.8
U2AF2P26368 LPIN1-209ENST00000449576 3077 ntTSL 2 BASIC14.33□□□□□ -0.125e-6■■□□□ 13.8
U2AF2P26368 LPIN1-204ENST00000396099 3228 ntTSL 513.79□□□□□ -0.25e-6■■□□□ 13.8
U2AF2P26368 ACP2-209ENST00000530453 826 ntTSL 2 BASIC13.24□□□□□ -0.295e-6■■□□□ 13.8
U2AF2P26368 AP5M1-202ENST00000431972 1815 ntTSL 2 BASIC12.68□□□□□ -0.385e-6■■□□□ 13.8
U2AF2P26368 PLEKHH2-203ENST00000405223 3623 ntTSL 211.79□□□□□ -0.525e-6■■□□□ 13.8
U2AF2P26368 LPIN1-205ENST00000404113 4005 ntTSL 1 (best)11.25□□□□□ -0.615e-6■■□□□ 13.8
U2AF2P26368 ACP2-214ENST00000534752 274 ntTSL 510.87□□□□□ -0.675e-6■■□□□ 13.8
U2AF2P26368 LPIN1-201ENST00000256720 5384 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.685e-6■■□□□ 13.8
U2AF2P26368 LPIN1-207ENST00000425416 5582 ntTSL 2 BASIC10.43□□□□□ -0.745e-6■■□□□ 13.8
U2AF2P26368 PLEKHH2-202ENST00000405000 6685 ntTSL 1 (best)9.83□□□□□ -0.845e-6■■□□□ 13.8
U2AF2P26368 LPIN1-202ENST00000396097 5690 ntTSL 5 BASIC8.7□□□□□ -1.025e-6■■□□□ 13.8
U2AF2P26368 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.225e-6■■□□□ 13.8
U2AF2P26368 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.645e-6■■□□□ 13.8
U2AF2P26368 SFXN1-208ENST00000507823 2611 ntTSL 220.54■□□□□ 0.888e-7■■□□□ 13.8
U2AF2P26368 TRAPPC12-210ENST00000441983 683 ntTSL 317.24■□□□□ 0.351e-7■■□□□ 13.8
U2AF2P26368 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC19.57■□□□□ 0.721e-8■■□□□ 13.8
U2AF2P26368 DGCR2-202ENST00000389262 4814 ntTSL 1 (best)15.8■□□□□ 0.121e-8■■□□□ 13.8
U2AF2P26368 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.021e-8■■□□□ 13.8
U2AF2P26368 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC14.47□□□□□ -0.091e-8■■□□□ 13.8
U2AF2P26368 DGCR2-205ENST00000537045 4361 ntTSL 2 BASIC12.98□□□□□ -0.331e-8■■□□□ 13.8
U2AF2P26368 ARL15-205ENST00000507646 578 ntTSL 5 BASIC12.76□□□□□ -0.371e-8■■□□□ 13.8
U2AF2P26368 DGCR2-204ENST00000473832 606 ntTSL 511.99□□□□□ -0.491e-8■■□□□ 13.8
U2AF2P26368 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.591e-8■■□□□ 13.8
U2AF2P26368 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.591e-8■■□□□ 13.8
U2AF2P26368 ARL15-206ENST00000510591 804 ntTSL 54.12□□□□□ -1.751e-8■■□□□ 13.8
U2AF2P26368 GSAP-209ENST00000449779 2975 ntTSL 28.73□□□□□ -1.012e-10■■□□□ 13.8
U2AF2P26368 GSAP-207ENST00000440473 866 ntTSL 58.12□□□□□ -1.112e-10■■□□□ 13.8
U2AF2P26368 GSAP-203ENST00000415112 564 ntTSL 32.26□□□□□ -2.052e-10■■□□□ 13.8
U2AF2P26368 SNHG14-214ENST00000551361 550 ntTSL 32.58□□□□□ -26e-8■■□□□ 13.8
U2AF2P26368 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.763e-10■■□□□ 13.8
U2AF2P26368 USP7-208ENST00000563961 4533 ntTSL 516.4■□□□□ 0.223e-10■■□□□ 13.8
U2AF2P26368 USP7-207ENST00000563085 3194 ntTSL 27.14□□□□□ -1.273e-10■■□□□ 13.8
U2AF2P26368 USP7-210ENST00000565455 3554 ntTSL 26.43□□□□□ -1.383e-10■■□□□ 13.8
U2AF2P26368 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.42□□□□□ -1.383e-10■■□□□ 13.8
U2AF2P26368 SAP30BP-224ENST00000584557 2000 nt25.36■■□□□ 1.651e-9■■□□□ 13.8
U2AF2P26368 SAP30BP-220ENST00000583329 998 ntTSL 315.33■□□□□ 0.041e-9■■□□□ 13.8
U2AF2P26368 SAP30BP-207ENST00000578756 652 ntTSL 214.11□□□□□ -0.151e-9■■□□□ 13.8
U2AF2P26368 SAP30BP-216ENST00000581385 253 ntTSL 21.29□□□□□ -2.21e-9■■□□□ 13.8
U2AF2P26368 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.746e-7■■□□□ 13.8
U2AF2P26368 IP6K2-227ENST00000479914 1077 ntTSL 1 (best)19.34■□□□□ 0.696e-9■■□□□ 13.8
U2AF2P26368 IP6K2-201ENST00000328631 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.086e-9■■□□□ 13.8
U2AF2P26368 IP6K2-220ENST00000449563 580 ntTSL 414.72□□□□□ -0.056e-9■■□□□ 13.8
U2AF2P26368 IP6K2-224ENST00000454335 631 ntTSL 413.89□□□□□ -0.196e-9■■□□□ 13.8
U2AF2P26368 IP6K2-206ENST00000413654 553 ntTSL 413.8□□□□□ -0.26e-9■■□□□ 13.8
U2AF2P26368 IP6K2-204ENST00000412850 543 ntTSL 411.36□□□□□ -0.596e-9■■□□□ 13.8
U2AF2P26368 IP6K2-215ENST00000437427 576 ntTSL 49.96□□□□□ -0.826e-9■■□□□ 13.8
U2AF2P26368 IP6K2-217ENST00000443853 579 ntTSL 39.96□□□□□ -0.826e-9■■□□□ 13.8
U2AF2P26368 IP6K2-228ENST00000491686 662 ntTSL 24.48□□□□□ -1.696e-9■■□□□ 13.8
U2AF2P26368 DENND4C-201ENST00000361024 3463 ntTSL 1 (best)8.27□□□□□ -1.083e-7■■□□□ 13.8
U2AF2P26368 DENND4C-203ENST00000380427 3479 ntTSL 28.01□□□□□ -1.133e-7■■□□□ 13.8
U2AF2P26368 DENND4C-202ENST00000380424 1547 ntTSL 25.21□□□□□ -1.583e-7■■□□□ 13.8
U2AF2P26368 XPO5-205ENST00000450462 633 ntTSL 49.94□□□□□ -0.825e-13■■□□□ 13.8
U2AF2P26368 HGD-204ENST00000475447 565 ntTSL 38.54□□□□□ -1.046e-16■■□□□ 13.8
Retrieved 100 of 36,523 protein–RNA pairs in 321.6 ms