Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC12.84□□□□□ -0.35
COL8A2P25067 ACTBP11-201ENST00000436287 1126 ntBASIC12.84□□□□□ -0.35
COL8A2P25067 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC12.84□□□□□ -0.35
COL8A2P25067 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC12.84□□□□□ -0.35
COL8A2P25067 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC12.84□□□□□ -0.35
COL8A2P25067 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
COL8A2P25067 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
COL8A2P25067 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC12.84□□□□□ -0.35
COL8A2P25067 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
COL8A2P25067 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
COL8A2P25067 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC12.84□□□□□ -0.35
COL8A2P25067 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC12.84□□□□□ -0.35
COL8A2P25067 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC12.84□□□□□ -0.35
COL8A2P25067 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
COL8A2P25067 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC12.84□□□□□ -0.35
COL8A2P25067 ECM1P1-201ENST00000604092 1279 ntBASIC12.84□□□□□ -0.35
COL8A2P25067 AC009542.2-202ENST00000619004 1067 ntBASIC12.84□□□□□ -0.35
COL8A2P25067 KRT8P14-201ENST00000414254 1442 ntBASIC12.84□□□□□ -0.35
COL8A2P25067 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC12.84□□□□□ -0.35
COL8A2P25067 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC12.84□□□□□ -0.35
COL8A2P25067 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
COL8A2P25067 AC106881.1-201ENST00000605849 3329 ntBASIC12.84□□□□□ -0.35
COL8A2P25067 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC12.84□□□□□ -0.35
COL8A2P25067 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
COL8A2P25067 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
COL8A2P25067 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
COL8A2P25067 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC12.84□□□□□ -0.35
COL8A2P25067 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC12.84□□□□□ -0.35
COL8A2P25067 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
COL8A2P25067 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
COL8A2P25067 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
COL8A2P25067 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
COL8A2P25067 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC12.84□□□□□ -0.35
COL8A2P25067 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
COL8A2P25067 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
COL8A2P25067 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
COL8A2P25067 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
COL8A2P25067 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
COL8A2P25067 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
COL8A2P25067 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
COL8A2P25067 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
COL8A2P25067 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
COL8A2P25067 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
COL8A2P25067 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
COL8A2P25067 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
COL8A2P25067 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
COL8A2P25067 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
COL8A2P25067 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
COL8A2P25067 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC12.83□□□□□ -0.36
COL8A2P25067 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
COL8A2P25067 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
COL8A2P25067 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
COL8A2P25067 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC12.83□□□□□ -0.36
COL8A2P25067 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
COL8A2P25067 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC12.83□□□□□ -0.36
COL8A2P25067 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
COL8A2P25067 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
COL8A2P25067 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC12.83□□□□□ -0.36
COL8A2P25067 EIF3FP3-201ENST00000434851 1086 ntBASIC12.83□□□□□ -0.36
COL8A2P25067 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
COL8A2P25067 AL355994.2-201ENST00000447882 704 ntBASIC12.83□□□□□ -0.36
COL8A2P25067 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
COL8A2P25067 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
COL8A2P25067 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
COL8A2P25067 AC022616.1-201ENST00000518688 554 ntBASIC12.83□□□□□ -0.36
COL8A2P25067 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
COL8A2P25067 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC12.83□□□□□ -0.36
COL8A2P25067 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
COL8A2P25067 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC12.83□□□□□ -0.36
COL8A2P25067 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC12.83□□□□□ -0.36
COL8A2P25067 RN7SL48P-201ENST00000579283 293 ntBASIC12.83□□□□□ -0.36
COL8A2P25067 AC006453.4-201ENST00000636949 1252 ntBASIC12.83□□□□□ -0.36
COL8A2P25067 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
COL8A2P25067 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC12.83□□□□□ -0.36
COL8A2P25067 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC12.83□□□□□ -0.36
COL8A2P25067 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
COL8A2P25067 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC12.83□□□□□ -0.36
COL8A2P25067 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC12.83□□□□□ -0.36
COL8A2P25067 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC12.83□□□□□ -0.36
COL8A2P25067 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC12.83□□□□□ -0.36
COL8A2P25067 ZBTB45P1-201ENST00000452761 1456 ntBASIC12.83□□□□□ -0.36
COL8A2P25067 TUBB1P2-201ENST00000422712 1306 ntBASIC12.83□□□□□ -0.36
COL8A2P25067 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC12.83□□□□□ -0.36
COL8A2P25067 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC12.83□□□□□ -0.36
COL8A2P25067 TUBB1P1-201ENST00000503144 1300 ntBASIC12.83□□□□□ -0.36
COL8A2P25067 AL359258.3-201ENST00000622910 2331 ntBASIC12.83□□□□□ -0.36
COL8A2P25067 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
COL8A2P25067 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
COL8A2P25067 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
COL8A2P25067 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC12.83□□□□□ -0.36
COL8A2P25067 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
COL8A2P25067 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
COL8A2P25067 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC12.82□□□□□ -0.36
COL8A2P25067 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
COL8A2P25067 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC12.82□□□□□ -0.36
COL8A2P25067 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC12.82□□□□□ -0.36
COL8A2P25067 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
COL8A2P25067 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
COL8A2P25067 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
COL8A2P25067 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms