Protein–RNA interactions for Protein: P25054

APC, Adenomatous polyposis coli protein, humanhuman

Predictions only

Length 2,843 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APCP25054 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
APCP25054 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
APCP25054 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
APCP25054 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC12.35□□□□□ -0.43
APCP25054 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
APCP25054 R3HDM2P2-201ENST00000401880 2116 ntBASIC12.35□□□□□ -0.43
APCP25054 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
APCP25054 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
APCP25054 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC12.35□□□□□ -0.43
APCP25054 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC12.35□□□□□ -0.43
APCP25054 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
APCP25054 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC12.35□□□□□ -0.43
APCP25054 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
APCP25054 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC12.35□□□□□ -0.43
APCP25054 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC12.35□□□□□ -0.43
APCP25054 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
APCP25054 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
APCP25054 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
APCP25054 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
APCP25054 AC012508.2-201ENST00000567613 1472 ntBASIC12.35□□□□□ -0.43
APCP25054 GCK-209ENST00000616242 2260 ntTSL 5 BASIC12.35□□□□□ -0.43
APCP25054 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
APCP25054 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
APCP25054 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
APCP25054 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
APCP25054 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
APCP25054 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
APCP25054 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
APCP25054 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC12.35□□□□□ -0.43
APCP25054 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC12.35□□□□□ -0.43
APCP25054 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC12.35□□□□□ -0.43
APCP25054 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC12.35□□□□□ -0.43
APCP25054 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
APCP25054 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC12.35□□□□□ -0.43
APCP25054 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
APCP25054 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
APCP25054 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
APCP25054 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC12.35□□□□□ -0.43
APCP25054 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC12.35□□□□□ -0.43
APCP25054 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
APCP25054 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
APCP25054 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APCP25054 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC12.34□□□□□ -0.43
APCP25054 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
APCP25054 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APCP25054 MIR645-201ENST00000385283 94 ntBASIC12.34□□□□□ -0.43
APCP25054 OR10N1P-201ENST00000392758 869 ntBASIC12.34□□□□□ -0.43
APCP25054 OR51A9P-201ENST00000422578 911 ntBASIC12.34□□□□□ -0.43
APCP25054 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC12.34□□□□□ -0.43
APCP25054 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC12.34□□□□□ -0.43
APCP25054 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC12.34□□□□□ -0.43
APCP25054 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC12.34□□□□□ -0.43
APCP25054 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APCP25054 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC12.34□□□□□ -0.43
APCP25054 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
APCP25054 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APCP25054 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
APCP25054 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APCP25054 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC12.34□□□□□ -0.43
APCP25054 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APCP25054 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APCP25054 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC12.34□□□□□ -0.43
APCP25054 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
APCP25054 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC12.34□□□□□ -0.43
APCP25054 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APCP25054 ZBED1P1-201ENST00000502364 1930 ntBASIC12.34□□□□□ -0.43
APCP25054 SUPT20HL2-201ENST00000486479 2409 ntBASIC12.34□□□□□ -0.43
APCP25054 AC092896.1-201ENST00000465850 380 ntBASIC12.34□□□□□ -0.43
APCP25054 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC12.34□□□□□ -0.43
APCP25054 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
APCP25054 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC12.34□□□□□ -0.43
APCP25054 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC12.34□□□□□ -0.43
APCP25054 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APCP25054 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
APCP25054 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC12.34□□□□□ -0.43
APCP25054 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APCP25054 AC023090.2-201ENST00000625182 2110 ntBASIC12.34□□□□□ -0.43
APCP25054 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC12.34□□□□□ -0.43
APCP25054 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
APCP25054 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
APCP25054 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APCP25054 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APCP25054 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC12.34□□□□□ -0.43
APCP25054 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
APCP25054 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APCP25054 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APCP25054 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC12.34□□□□□ -0.43
APCP25054 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APCP25054 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC12.33□□□□□ -0.43
APCP25054 CIDEC-205ENST00000443115 443 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
APCP25054 AC027612.2-202ENST00000445955 1199 ntBASIC12.33□□□□□ -0.43
APCP25054 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC12.33□□□□□ -0.43
APCP25054 RN7SL530P-201ENST00000485097 298 ntBASIC12.33□□□□□ -0.43
APCP25054 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC12.33□□□□□ -0.43
APCP25054 COX5A-205ENST00000568517 582 ntTSL 3 BASIC12.33□□□□□ -0.43
APCP25054 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC12.33□□□□□ -0.43
APCP25054 AC026471.1-201ENST00000564629 3026 ntBASIC12.33□□□□□ -0.43
APCP25054 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
APCP25054 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
APCP25054 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms