Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.99□□□□□ -0.01
CDH3P22223 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.99□□□□□ -0.01
CDH3P22223 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH3P22223 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDH3P22223 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.99□□□□□ -0.01
CDH3P22223 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDH3P22223 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
CDH3P22223 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.99□□□□□ -0.01
CDH3P22223 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDH3P22223 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDH3P22223 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH3P22223 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CDH3P22223 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH3P22223 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH3P22223 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDH3P22223 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
CDH3P22223 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH3P22223 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDH3P22223 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH3P22223 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.99□□□□□ -0.01
CDH3P22223 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH3P22223 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH3P22223 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.99□□□□□ -0.01
CDH3P22223 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CDH3P22223 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH3P22223 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH3P22223 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
CDH3P22223 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CDH3P22223 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.98□□□□□ -0.01
CDH3P22223 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.98□□□□□ -0.01
CDH3P22223 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CDH3P22223 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH3P22223 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CDH3P22223 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.98□□□□□ -0.01
CDH3P22223 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.98□□□□□ -0.01
CDH3P22223 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH3P22223 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CDH3P22223 PTENP1-202ENST00000532280 3996 ntBASIC14.98□□□□□ -0.01
CDH3P22223 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH3P22223 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH3P22223 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH3P22223 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CDH3P22223 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CDH3P22223 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.98□□□□□ -0.01
CDH3P22223 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CDH3P22223 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH3P22223 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.98□□□□□ -0.01
CDH3P22223 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CDH3P22223 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
CDH3P22223 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH3P22223 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.98□□□□□ -0.01
CDH3P22223 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.98□□□□□ -0.01
CDH3P22223 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CDH3P22223 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.98□□□□□ -0.01
CDH3P22223 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.98□□□□□ -0.01
CDH3P22223 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH3P22223 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CDH3P22223 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CDH3P22223 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.98□□□□□ -0.01
CDH3P22223 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.98□□□□□ -0.01
CDH3P22223 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH3P22223 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CDH3P22223 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.98□□□□□ -0.01
CDH3P22223 AC097376.2-205ENST00000610159 5334 ntBASIC14.98□□□□□ -0.01
CDH3P22223 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.98□□□□□ -0.01
CDH3P22223 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH3P22223 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH3P22223 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.98□□□□□ -0.01
CDH3P22223 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CDH3P22223 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
CDH3P22223 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH3P22223 AC107918.4-201ENST00000641966 3141 ntBASIC14.97□□□□□ -0.01
CDH3P22223 AC092127.1-201ENST00000567093 3455 ntBASIC14.97□□□□□ -0.01
CDH3P22223 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH3P22223 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CDH3P22223 AC006486.2-201ENST00000624246 2199 ntBASIC14.97□□□□□ -0.01
CDH3P22223 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
CDH3P22223 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDH3P22223 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH3P22223 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH3P22223 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH3P22223 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH3P22223 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.97□□□□□ -0.01
CDH3P22223 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
CDH3P22223 GPR53P-205ENST00000457298 1084 ntBASIC14.97□□□□□ -0.01
CDH3P22223 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.97□□□□□ -0.01
CDH3P22223 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH3P22223 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDH3P22223 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
CDH3P22223 AC015936.2-201ENST00000593177 259 ntBASIC14.97□□□□□ -0.01
CDH3P22223 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC14.97□□□□□ -0.01
CDH3P22223 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.97□□□□□ -0.01
CDH3P22223 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDH3P22223 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CDH3P22223 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.97□□□□□ -0.01
CDH3P22223 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH3P22223 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
CDH3P22223 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH3P22223 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDH3P22223 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms