Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ERCC3P19447 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC17.6■□□□□ 0.41
ERCC3P19447 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
ERCC3P19447 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ERCC3P19447 LCK-206ENST00000373564 2137 ntTSL 5 BASIC17.6■□□□□ 0.41
ERCC3P19447 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ERCC3P19447 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
ERCC3P19447 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
ERCC3P19447 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
ERCC3P19447 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
ERCC3P19447 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC17.59■□□□□ 0.41
ERCC3P19447 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC17.59■□□□□ 0.41
ERCC3P19447 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ERCC3P19447 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ERCC3P19447 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ERCC3P19447 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
ERCC3P19447 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC17.59■□□□□ 0.41
ERCC3P19447 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC17.59■□□□□ 0.41
ERCC3P19447 AC009090.5-201ENST00000624886 2285 ntBASIC17.59■□□□□ 0.41
ERCC3P19447 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ERCC3P19447 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC17.59■□□□□ 0.41
ERCC3P19447 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ERCC3P19447 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
ERCC3P19447 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ERCC3P19447 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC17.59■□□□□ 0.41
ERCC3P19447 AL158070.2-201ENST00000623713 1621 ntBASIC17.59■□□□□ 0.41
ERCC3P19447 AC018735.1-201ENST00000437208 1502 ntBASIC17.59■□□□□ 0.41
ERCC3P19447 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ERCC3P19447 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ERCC3P19447 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ERCC3P19447 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ERCC3P19447 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ERCC3P19447 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC17.59■□□□□ 0.41
ERCC3P19447 SLC25A24P2-201ENST00000415059 510 ntBASIC17.59■□□□□ 0.41
ERCC3P19447 IGHJ2P-201ENST00000454480 60 ntBASIC17.59■□□□□ 0.41
ERCC3P19447 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC17.59■□□□□ 0.41
ERCC3P19447 ACTG1P17-201ENST00000558391 1119 ntBASIC17.59■□□□□ 0.41
ERCC3P19447 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC17.59■□□□□ 0.41
ERCC3P19447 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ERCC3P19447 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC17.59■□□□□ 0.41
ERCC3P19447 PPA1-206ENST00000625364 644 ntTSL 5 BASIC17.59■□□□□ 0.41
ERCC3P19447 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ERCC3P19447 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
ERCC3P19447 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC17.59■□□□□ 0.41
ERCC3P19447 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC17.59■□□□□ 0.41
ERCC3P19447 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
ERCC3P19447 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
ERCC3P19447 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ERCC3P19447 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ERCC3P19447 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
ERCC3P19447 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
ERCC3P19447 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC17.58■□□□□ 0.41
ERCC3P19447 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ERCC3P19447 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
ERCC3P19447 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
ERCC3P19447 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ERCC3P19447 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ERCC3P19447 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ERCC3P19447 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC17.58■□□□□ 0.4
ERCC3P19447 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ERCC3P19447 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
ERCC3P19447 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ERCC3P19447 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
ERCC3P19447 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ERCC3P19447 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
ERCC3P19447 B9D1-203ENST00000395615 805 ntTSL 3 BASIC17.58■□□□□ 0.4
ERCC3P19447 AC004945.1-201ENST00000416738 983 ntBASIC17.58■□□□□ 0.4
ERCC3P19447 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC17.58■□□□□ 0.4
ERCC3P19447 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC17.58■□□□□ 0.4
ERCC3P19447 AC004066.1-201ENST00000502488 802 ntBASIC17.58■□□□□ 0.4
ERCC3P19447 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
ERCC3P19447 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC17.58■□□□□ 0.4
ERCC3P19447 ARL16-210ENST00000574938 751 ntTSL 2 BASIC17.58■□□□□ 0.4
ERCC3P19447 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
ERCC3P19447 AL021578.1-201ENST00000613646 709 ntBASIC17.58■□□□□ 0.4
ERCC3P19447 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ERCC3P19447 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC17.58■□□□□ 0.4
ERCC3P19447 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC17.58■□□□□ 0.4
ERCC3P19447 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ERCC3P19447 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ERCC3P19447 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
ERCC3P19447 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ERCC3P19447 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
ERCC3P19447 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ERCC3P19447 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
ERCC3P19447 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.4
ERCC3P19447 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
ERCC3P19447 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ERCC3P19447 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ERCC3P19447 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC17.58■□□□□ 0.4
ERCC3P19447 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.58■□□□□ 0.4
ERCC3P19447 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC3P19447 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC3P19447 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
ERCC3P19447 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC3P19447 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC3P19447 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC3P19447 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC3P19447 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC3P19447 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms