Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 CU639417.3-201ENST00000624240 1404 ntBASIC16.34■□□□□ 0.21
CD58P19256 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CD58P19256 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD58P19256 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CD58P19256 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.34■□□□□ 0.21
CD58P19256 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD58P19256 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CD58P19256 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CD58P19256 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CD58P19256 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.34■□□□□ 0.21
CD58P19256 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD58P19256 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD58P19256 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CD58P19256 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD58P19256 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD58P19256 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.34■□□□□ 0.21
CD58P19256 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.33■□□□□ 0.21
CD58P19256 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CD58P19256 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
CD58P19256 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.33■□□□□ 0.21
CD58P19256 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CD58P19256 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CD58P19256 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CD58P19256 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CD58P19256 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
CD58P19256 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
CD58P19256 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.33■□□□□ 0.2
CD58P19256 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CD58P19256 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CD58P19256 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CD58P19256 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.33■□□□□ 0.2
CD58P19256 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
CD58P19256 APOA1-205ENST00000375329 927 ntTSL 2 BASIC16.33■□□□□ 0.2
CD58P19256 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.33■□□□□ 0.2
CD58P19256 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.33■□□□□ 0.2
CD58P19256 TMEM14DP-201ENST00000422205 345 ntBASIC16.33■□□□□ 0.2
CD58P19256 NME2P1-201ENST00000426182 414 ntBASIC16.33■□□□□ 0.2
CD58P19256 HLA-K-203ENST00000430151 1046 ntBASIC16.33■□□□□ 0.2
CD58P19256 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC16.33■□□□□ 0.2
CD58P19256 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CD58P19256 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC16.33■□□□□ 0.2
CD58P19256 MIR5189-201ENST00000577370 114 ntBASIC16.33■□□□□ 0.2
CD58P19256 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.33■□□□□ 0.2
CD58P19256 PIGL-212ENST00000581006 554 ntTSL 4 BASIC16.33■□□□□ 0.2
CD58P19256 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC16.33■□□□□ 0.2
CD58P19256 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC16.33■□□□□ 0.2
CD58P19256 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.33■□□□□ 0.2
CD58P19256 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC16.33■□□□□ 0.2
CD58P19256 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.33■□□□□ 0.2
CD58P19256 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.33■□□□□ 0.2
CD58P19256 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CD58P19256 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CD58P19256 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
CD58P19256 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CD58P19256 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.33■□□□□ 0.2
CD58P19256 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CD58P19256 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CD58P19256 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CD58P19256 ACE3P-201ENST00000423435 1973 ntBASIC16.33■□□□□ 0.2
CD58P19256 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CD58P19256 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CD58P19256 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.33■□□□□ 0.2
CD58P19256 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CD58P19256 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD58P19256 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CD58P19256 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD58P19256 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD58P19256 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD58P19256 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD58P19256 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD58P19256 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD58P19256 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
CD58P19256 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD58P19256 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.32■□□□□ 0.2
CD58P19256 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD58P19256 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD58P19256 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.32■□□□□ 0.2
CD58P19256 KLF2P2-201ENST00000416807 1039 ntBASIC16.32■□□□□ 0.2
CD58P19256 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC16.32■□□□□ 0.2
CD58P19256 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC16.32■□□□□ 0.2
CD58P19256 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.32■□□□□ 0.2
CD58P19256 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD58P19256 TTTY23B-201ENST00000442790 549 ntBASIC16.32■□□□□ 0.2
CD58P19256 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.32■□□□□ 0.2
CD58P19256 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD58P19256 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC16.32■□□□□ 0.2
CD58P19256 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.32■□□□□ 0.2
CD58P19256 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CD58P19256 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC16.32■□□□□ 0.2
CD58P19256 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.32■□□□□ 0.2
CD58P19256 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.32■□□□□ 0.2
CD58P19256 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CD58P19256 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CD58P19256 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.32■□□□□ 0.2
CD58P19256 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC16.32■□□□□ 0.2
CD58P19256 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.32■□□□□ 0.2
CD58P19256 AC009486.1-201ENST00000569860 813 ntBASIC16.32■□□□□ 0.2
CD58P19256 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CD58P19256 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
CD58P19256 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms