Protein–RNA interactions for Protein: P18615

NELFE, Negative elongation factor E, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFEP18615 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NELFEP18615 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NELFEP18615 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
NELFEP18615 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
NELFEP18615 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC15.12■□□□□ 0.01
NELFEP18615 GRK6P1-201ENST00000400595 1711 ntBASIC15.12■□□□□ 0.01
NELFEP18615 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.12■□□□□ 0.01
NELFEP18615 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
NELFEP18615 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.12■□□□□ 0.01
NELFEP18615 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.12■□□□□ 0.01
NELFEP18615 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
NELFEP18615 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NELFEP18615 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
NELFEP18615 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
NELFEP18615 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
NELFEP18615 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
NELFEP18615 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.12■□□□□ 0.01
NELFEP18615 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.12■□□□□ 0.01
NELFEP18615 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.12■□□□□ 0.01
NELFEP18615 GPR53P-205ENST00000457298 1084 ntBASIC15.12■□□□□ 0.01
NELFEP18615 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.12■□□□□ 0.01
NELFEP18615 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.12■□□□□ 0.01
NELFEP18615 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
NELFEP18615 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.12■□□□□ 0.01
NELFEP18615 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
NELFEP18615 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.12■□□□□ 0.01
NELFEP18615 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.12■□□□□ 0.01
NELFEP18615 AL033527.5-201ENST00000641382 801 ntBASIC15.12■□□□□ 0.01
NELFEP18615 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NELFEP18615 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
NELFEP18615 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NELFEP18615 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NELFEP18615 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.12■□□□□ 0.01
NELFEP18615 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NELFEP18615 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NELFEP18615 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.12■□□□□ 0.01
NELFEP18615 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NELFEP18615 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NELFEP18615 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NELFEP18615 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NELFEP18615 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.11■□□□□ 0.01
NELFEP18615 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
NELFEP18615 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
NELFEP18615 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NELFEP18615 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
NELFEP18615 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
NELFEP18615 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
NELFEP18615 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NELFEP18615 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NELFEP18615 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NELFEP18615 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NELFEP18615 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NELFEP18615 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
NELFEP18615 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NELFEP18615 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
NELFEP18615 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
NELFEP18615 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
NELFEP18615 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NELFEP18615 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.11■□□□□ 0.01
NELFEP18615 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.11■□□□□ 0.01
NELFEP18615 KRT18P64-201ENST00000434946 1219 ntBASIC15.11■□□□□ 0.01
NELFEP18615 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.11■□□□□ 0.01
NELFEP18615 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.11■□□□□ 0.01
NELFEP18615 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
NELFEP18615 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.11■□□□□ 0.01
NELFEP18615 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC15.11■□□□□ 0.01
NELFEP18615 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.11■□□□□ 0.01
NELFEP18615 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NELFEP18615 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.11■□□□□ 0.01
NELFEP18615 NOP2-220ENST00000545915 630 ntTSL 2 BASIC15.11■□□□□ 0.01
NELFEP18615 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.11■□□□□ 0.01
NELFEP18615 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.11■□□□□ 0.01
NELFEP18615 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC15.11■□□□□ 0.01
NELFEP18615 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.11■□□□□ 0.01
NELFEP18615 AC097359.3-201ENST00000603982 1210 ntBASIC15.11■□□□□ 0.01
NELFEP18615 AL162274.1-201ENST00000617191 1098 ntBASIC15.11■□□□□ 0.01
NELFEP18615 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.11■□□□□ 0.01
NELFEP18615 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.11■□□□□ 0.01
NELFEP18615 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.11■□□□□ 0.01
NELFEP18615 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NELFEP18615 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.11■□□□□ 0.01
NELFEP18615 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NELFEP18615 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NELFEP18615 AC011477.6-201ENST00000604980 1927 ntBASIC15.11■□□□□ 0.01
NELFEP18615 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NELFEP18615 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NELFEP18615 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
NELFEP18615 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NELFEP18615 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NELFEP18615 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.11■□□□□ 0.01
NELFEP18615 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.11■□□□□ 0.01
NELFEP18615 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NELFEP18615 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.11■□□□□ 0.01
NELFEP18615 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
NELFEP18615 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NELFEP18615 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NELFEP18615 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.1■□□□□ 0.01
NELFEP18615 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NELFEP18615 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
NELFEP18615 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms