Protein–RNA interactions for Protein: P17302

GJA1, Gap junction alpha-1 protein, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GJA1P17302 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
GJA1P17302 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.68■□□□□ 0.1
GJA1P17302 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GJA1P17302 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GJA1P17302 AC011840.2-201ENST00000563063 1520 ntBASIC15.68■□□□□ 0.1
GJA1P17302 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GJA1P17302 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
GJA1P17302 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GJA1P17302 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GJA1P17302 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
GJA1P17302 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GJA1P17302 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
GJA1P17302 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GJA1P17302 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
GJA1P17302 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GJA1P17302 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GJA1P17302 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.68■□□□□ 0.1
GJA1P17302 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GJA1P17302 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GJA1P17302 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
GJA1P17302 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.68■□□□□ 0.1
GJA1P17302 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
GJA1P17302 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GJA1P17302 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
GJA1P17302 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GJA1P17302 CRCP-204ENST00000398684 492 ntTSL 2 BASIC15.68■□□□□ 0.1
GJA1P17302 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC15.68■□□□□ 0.1
GJA1P17302 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC15.68■□□□□ 0.1
GJA1P17302 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GJA1P17302 AC104073.2-201ENST00000453737 312 ntBASIC15.68■□□□□ 0.1
GJA1P17302 UPF3AP2-201ENST00000457924 1132 ntBASIC15.68■□□□□ 0.1
GJA1P17302 AC005740.2-201ENST00000511085 419 ntBASIC15.68■□□□□ 0.1
GJA1P17302 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
GJA1P17302 AC138627.1-207ENST00000641560 1006 ntBASIC15.68■□□□□ 0.1
GJA1P17302 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GJA1P17302 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GJA1P17302 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GJA1P17302 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
GJA1P17302 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
GJA1P17302 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GJA1P17302 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GJA1P17302 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GJA1P17302 AP000593.2-201ENST00000542775 1433 ntBASIC15.68■□□□□ 0.1
GJA1P17302 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GJA1P17302 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GJA1P17302 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
GJA1P17302 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.67■□□□□ 0.1
GJA1P17302 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GJA1P17302 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.67■□□□□ 0.1
GJA1P17302 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GJA1P17302 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.67■□□□□ 0.1
GJA1P17302 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
GJA1P17302 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GJA1P17302 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.67■□□□□ 0.1
GJA1P17302 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.67■□□□□ 0.1
GJA1P17302 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GJA1P17302 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.67■□□□□ 0.1
GJA1P17302 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GJA1P17302 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC15.67■□□□□ 0.1
GJA1P17302 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC15.67■□□□□ 0.1
GJA1P17302 RN7SL11P-201ENST00000471305 293 ntBASIC15.67■□□□□ 0.1
GJA1P17302 IMP3P2-201ENST00000489760 475 ntBASIC15.67■□□□□ 0.1
GJA1P17302 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GJA1P17302 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC15.67■□□□□ 0.1
GJA1P17302 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC15.67■□□□□ 0.1
GJA1P17302 FOS-206ENST00000555347 1280 ntTSL 2 BASIC15.67■□□□□ 0.1
GJA1P17302 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GJA1P17302 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
GJA1P17302 AC016629.1-201ENST00000596579 586 ntBASIC15.67■□□□□ 0.1
GJA1P17302 AP001505.2-201ENST00000616815 443 ntBASIC15.67■□□□□ 0.1
GJA1P17302 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC15.67■□□□□ 0.1
GJA1P17302 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GJA1P17302 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
GJA1P17302 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GJA1P17302 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GJA1P17302 E2F3P2-201ENST00000447755 1422 ntBASIC15.67■□□□□ 0.1
GJA1P17302 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
GJA1P17302 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GJA1P17302 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
GJA1P17302 TUBBP5-203ENST00000508529 1334 ntBASIC15.67■□□□□ 0.1
GJA1P17302 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GJA1P17302 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GJA1P17302 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GJA1P17302 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
GJA1P17302 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
GJA1P17302 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.66■□□□□ 0.1
GJA1P17302 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.66■□□□□ 0.1
GJA1P17302 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
GJA1P17302 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
GJA1P17302 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.66■□□□□ 0.1
GJA1P17302 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GJA1P17302 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
GJA1P17302 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GJA1P17302 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
GJA1P17302 AC091046.1-201ENST00000331871 207 ntBASIC15.66■□□□□ 0.1
GJA1P17302 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
GJA1P17302 DPM3-202ENST00000368399 517 ntBASIC15.66■□□□□ 0.1
GJA1P17302 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
GJA1P17302 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC15.66■□□□□ 0.1
GJA1P17302 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms