Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CCL3L1P16619 AC009486.1-201ENST00000569860 813 ntBASIC12.56□□□□□ -0.4
CCL3L1P16619 AP005019.2-201ENST00000615104 511 ntBASIC12.56□□□□□ -0.4
CCL3L1P16619 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC12.56□□□□□ -0.4
CCL3L1P16619 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
CCL3L1P16619 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC12.56□□□□□ -0.4
CCL3L1P16619 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC12.56□□□□□ -0.4
CCL3L1P16619 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCL3L1P16619 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CCL3L1P16619 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC12.56□□□□□ -0.4
CCL3L1P16619 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC12.56□□□□□ -0.4
CCL3L1P16619 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
CCL3L1P16619 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC12.56□□□□□ -0.4
CCL3L1P16619 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CCL3L1P16619 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCL3L1P16619 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CCL3L1P16619 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCL3L1P16619 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCL3L1P16619 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
CCL3L1P16619 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCL3L1P16619 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCL3L1P16619 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CCL3L1P16619 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCL3L1P16619 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCL3L1P16619 LILRP1-201ENST00000444199 1370 ntBASIC12.56□□□□□ -0.4
CCL3L1P16619 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCL3L1P16619 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC12.56□□□□□ -0.4
CCL3L1P16619 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CCL3L1P16619 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
CCL3L1P16619 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC12.55□□□□□ -0.4
CCL3L1P16619 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CCL3L1P16619 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
CCL3L1P16619 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCL3L1P16619 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCL3L1P16619 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
CCL3L1P16619 AL137783.1-201ENST00000623494 1896 ntBASIC12.55□□□□□ -0.4
CCL3L1P16619 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC12.55□□□□□ -0.4
CCL3L1P16619 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCL3L1P16619 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CCL3L1P16619 AC006058.4-201ENST00000624016 1670 ntBASIC12.55□□□□□ -0.4
CCL3L1P16619 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCL3L1P16619 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCL3L1P16619 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCL3L1P16619 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
CCL3L1P16619 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCL3L1P16619 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC12.55□□□□□ -0.4
CCL3L1P16619 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCL3L1P16619 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCL3L1P16619 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCL3L1P16619 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC12.55□□□□□ -0.4
CCL3L1P16619 ACTG1P3-201ENST00000431775 1114 ntBASIC12.55□□□□□ -0.4
CCL3L1P16619 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC12.55□□□□□ -0.4
CCL3L1P16619 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC12.55□□□□□ -0.4
CCL3L1P16619 AC007389.4-201ENST00000454674 793 ntBASIC12.55□□□□□ -0.4
CCL3L1P16619 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
CCL3L1P16619 KRT18P25-201ENST00000508931 1278 ntBASIC12.55□□□□□ -0.4
CCL3L1P16619 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC12.55□□□□□ -0.4
CCL3L1P16619 PTP4A1P2-201ENST00000546033 454 ntBASIC12.55□□□□□ -0.4
CCL3L1P16619 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCL3L1P16619 KSR1-207ENST00000578981 748 ntTSL 4 BASIC12.55□□□□□ -0.4
CCL3L1P16619 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC12.55□□□□□ -0.4
CCL3L1P16619 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC12.55□□□□□ -0.4
CCL3L1P16619 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CCL3L1P16619 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCL3L1P16619 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC12.55□□□□□ -0.4
CCL3L1P16619 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC12.55□□□□□ -0.4
CCL3L1P16619 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCL3L1P16619 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CCL3L1P16619 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCL3L1P16619 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCL3L1P16619 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CCL3L1P16619 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CCL3L1P16619 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCL3L1P16619 AC134312.5-201ENST00000568031 1313 ntBASIC12.55□□□□□ -0.4
CCL3L1P16619 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC12.55□□□□□ -0.4
CCL3L1P16619 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
CCL3L1P16619 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCL3L1P16619 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCL3L1P16619 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCL3L1P16619 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCL3L1P16619 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCL3L1P16619 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CCL3L1P16619 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CCL3L1P16619 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCL3L1P16619 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CCL3L1P16619 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CCL3L1P16619 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CCL3L1P16619 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC12.54□□□□□ -0.4
CCL3L1P16619 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCL3L1P16619 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC12.54□□□□□ -0.4
CCL3L1P16619 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCL3L1P16619 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCL3L1P16619 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC12.54□□□□□ -0.4
CCL3L1P16619 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCL3L1P16619 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
CCL3L1P16619 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CCL3L1P16619 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC12.54□□□□□ -0.4
CCL3L1P16619 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
CCL3L1P16619 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC12.54□□□□□ -0.4
CCL3L1P16619 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms