Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HLA-DOBP13765 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.65□□□□□ -0.22
HLA-DOBP13765 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HLA-DOBP13765 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
HLA-DOBP13765 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HLA-DOBP13765 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HLA-DOBP13765 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HLA-DOBP13765 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HLA-DOBP13765 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HLA-DOBP13765 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HLA-DOBP13765 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.65□□□□□ -0.22
HLA-DOBP13765 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HLA-DOBP13765 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
HLA-DOBP13765 C1QBPP1-201ENST00000400117 770 ntBASIC13.65□□□□□ -0.22
HLA-DOBP13765 AC087499.6-201ENST00000411576 835 ntBASIC13.65□□□□□ -0.22
HLA-DOBP13765 AL442647.2-201ENST00000429864 857 ntBASIC13.65□□□□□ -0.22
HLA-DOBP13765 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.65□□□□□ -0.22
HLA-DOBP13765 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.65□□□□□ -0.22
HLA-DOBP13765 ELK1P1-201ENST00000485699 580 ntBASIC13.65□□□□□ -0.22
HLA-DOBP13765 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.65□□□□□ -0.22
HLA-DOBP13765 AC124283.3-201ENST00000570869 594 ntBASIC13.65□□□□□ -0.22
HLA-DOBP13765 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.65□□□□□ -0.22
HLA-DOBP13765 SPDYE22P-201ENST00000582158 798 ntBASIC13.65□□□□□ -0.22
HLA-DOBP13765 CTBP2P3-201ENST00000585629 1255 ntBASIC13.65□□□□□ -0.22
HLA-DOBP13765 AC093813.1-201ENST00000605066 256 ntBASIC13.65□□□□□ -0.22
HLA-DOBP13765 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HLA-DOBP13765 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HLA-DOBP13765 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.65□□□□□ -0.22
HLA-DOBP13765 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
HLA-DOBP13765 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HLA-DOBP13765 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HLA-DOBP13765 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HLA-DOBP13765 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
HLA-DOBP13765 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HLA-DOBP13765 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.65□□□□□ -0.22
HLA-DOBP13765 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
HLA-DOBP13765 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.65□□□□□ -0.22
HLA-DOBP13765 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HLA-DOBP13765 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
HLA-DOBP13765 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HLA-DOBP13765 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HLA-DOBP13765 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.65□□□□□ -0.22
HLA-DOBP13765 AC018529.2-202ENST00000611482 3087 ntBASIC13.65□□□□□ -0.23
HLA-DOBP13765 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
HLA-DOBP13765 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC13.64□□□□□ -0.23
HLA-DOBP13765 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
HLA-DOBP13765 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HLA-DOBP13765 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
HLA-DOBP13765 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HLA-DOBP13765 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HLA-DOBP13765 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HLA-DOBP13765 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.64□□□□□ -0.23
HLA-DOBP13765 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
HLA-DOBP13765 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
HLA-DOBP13765 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.64□□□□□ -0.23
HLA-DOBP13765 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
HLA-DOBP13765 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
HLA-DOBP13765 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.64□□□□□ -0.23
HLA-DOBP13765 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
HLA-DOBP13765 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
HLA-DOBP13765 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HLA-DOBP13765 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.64□□□□□ -0.23
HLA-DOBP13765 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
HLA-DOBP13765 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HLA-DOBP13765 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HLA-DOBP13765 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HLA-DOBP13765 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.64□□□□□ -0.23
HLA-DOBP13765 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.64□□□□□ -0.23
HLA-DOBP13765 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HLA-DOBP13765 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
HLA-DOBP13765 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HLA-DOBP13765 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.64□□□□□ -0.23
HLA-DOBP13765 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HLA-DOBP13765 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HLA-DOBP13765 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HLA-DOBP13765 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
HLA-DOBP13765 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HLA-DOBP13765 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.64□□□□□ -0.23
HLA-DOBP13765 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
HLA-DOBP13765 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.64□□□□□ -0.23
HLA-DOBP13765 HLA-K-203ENST00000430151 1046 ntBASIC13.64□□□□□ -0.23
HLA-DOBP13765 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.64□□□□□ -0.23
HLA-DOBP13765 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.64□□□□□ -0.23
HLA-DOBP13765 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC13.64□□□□□ -0.23
HLA-DOBP13765 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC13.64□□□□□ -0.23
HLA-DOBP13765 AC190387.1-201ENST00000551683 408 ntBASIC13.64□□□□□ -0.23
HLA-DOBP13765 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC13.64□□□□□ -0.23
HLA-DOBP13765 WASH4P-201ENST00000564273 1246 ntBASIC13.64□□□□□ -0.23
HLA-DOBP13765 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
HLA-DOBP13765 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HLA-DOBP13765 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
HLA-DOBP13765 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC13.64□□□□□ -0.23
HLA-DOBP13765 YTHDF3-AS1-201ENST00000603538 718 ntBASIC13.64□□□□□ -0.23
HLA-DOBP13765 TMEM261P1-201ENST00000604899 340 ntBASIC13.64□□□□□ -0.23
HLA-DOBP13765 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.64□□□□□ -0.23
HLA-DOBP13765 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
HLA-DOBP13765 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HLA-DOBP13765 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HLA-DOBP13765 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.64□□□□□ -0.23
HLA-DOBP13765 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms