Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
DEFA4P12838 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC12.45□□□□□ -0.42
DEFA4P12838 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC12.45□□□□□ -0.42
DEFA4P12838 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
DEFA4P12838 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
DEFA4P12838 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
DEFA4P12838 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC12.45□□□□□ -0.42
DEFA4P12838 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC12.45□□□□□ -0.42
DEFA4P12838 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
DEFA4P12838 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
DEFA4P12838 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
DEFA4P12838 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
DEFA4P12838 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC12.45□□□□□ -0.42
DEFA4P12838 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC12.45□□□□□ -0.42
DEFA4P12838 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
DEFA4P12838 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
DEFA4P12838 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
DEFA4P12838 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
DEFA4P12838 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
DEFA4P12838 CETN4P-206ENST00000642099 2168 ntBASIC12.45□□□□□ -0.42
DEFA4P12838 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC12.45□□□□□ -0.42
DEFA4P12838 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
DEFA4P12838 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC12.45□□□□□ -0.42
DEFA4P12838 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
DEFA4P12838 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
DEFA4P12838 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC12.45□□□□□ -0.42
DEFA4P12838 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC12.45□□□□□ -0.42
DEFA4P12838 R3HDM2P2-201ENST00000401880 2116 ntBASIC12.45□□□□□ -0.42
DEFA4P12838 MIR1233-2-201ENST00000408138 82 ntBASIC12.45□□□□□ -0.42
DEFA4P12838 MIR1233-1-201ENST00000408722 82 ntBASIC12.45□□□□□ -0.42
DEFA4P12838 AZGP1P1-201ENST00000411909 902 ntBASIC12.45□□□□□ -0.42
DEFA4P12838 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
DEFA4P12838 SERBP1P3-201ENST00000459980 809 ntBASIC12.45□□□□□ -0.42
DEFA4P12838 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
DEFA4P12838 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC12.45□□□□□ -0.42
DEFA4P12838 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC12.45□□□□□ -0.42
DEFA4P12838 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC12.45□□□□□ -0.42
DEFA4P12838 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC12.45□□□□□ -0.42
DEFA4P12838 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC12.45□□□□□ -0.42
DEFA4P12838 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC12.45□□□□□ -0.42
DEFA4P12838 AP001059.3-201ENST00000619053 235 ntBASIC12.45□□□□□ -0.42
DEFA4P12838 MIR6069-201ENST00000620069 79 ntBASIC12.45□□□□□ -0.42
DEFA4P12838 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC12.45□□□□□ -0.42
DEFA4P12838 RAB34-224ENST00000636513 888 ntTSL 5 BASIC12.45□□□□□ -0.42
DEFA4P12838 AC134684.3-201ENST00000641758 218 ntBASIC12.45□□□□□ -0.42
DEFA4P12838 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
DEFA4P12838 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC12.45□□□□□ -0.42
DEFA4P12838 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
DEFA4P12838 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
DEFA4P12838 AC097359.2-201ENST00000604992 2389 ntBASIC12.45□□□□□ -0.42
DEFA4P12838 IMPDH1P4-201ENST00000445028 1534 ntBASIC12.45□□□□□ -0.42
DEFA4P12838 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
DEFA4P12838 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
DEFA4P12838 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
DEFA4P12838 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
DEFA4P12838 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
DEFA4P12838 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
DEFA4P12838 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
DEFA4P12838 TET3-201ENST00000305799 5174 ntTSL 5 BASIC12.45□□□□□ -0.42
DEFA4P12838 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC12.45□□□□□ -0.42
DEFA4P12838 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
DEFA4P12838 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
DEFA4P12838 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
DEFA4P12838 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
DEFA4P12838 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
DEFA4P12838 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
DEFA4P12838 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
DEFA4P12838 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC12.44□□□□□ -0.42
DEFA4P12838 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
DEFA4P12838 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC12.44□□□□□ -0.42
DEFA4P12838 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
DEFA4P12838 GOLGA6L17P-202ENST00000614358 1398 ntBASIC12.44□□□□□ -0.42
DEFA4P12838 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
DEFA4P12838 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC12.44□□□□□ -0.42
DEFA4P12838 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
DEFA4P12838 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC12.44□□□□□ -0.42
DEFA4P12838 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
DEFA4P12838 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
DEFA4P12838 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
DEFA4P12838 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
DEFA4P12838 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
DEFA4P12838 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
DEFA4P12838 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
DEFA4P12838 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
DEFA4P12838 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
DEFA4P12838 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
DEFA4P12838 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
DEFA4P12838 GPS2P2-201ENST00000430745 888 ntBASIC12.44□□□□□ -0.42
DEFA4P12838 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
DEFA4P12838 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC12.44□□□□□ -0.42
DEFA4P12838 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
DEFA4P12838 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC12.44□□□□□ -0.42
DEFA4P12838 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
DEFA4P12838 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC12.44□□□□□ -0.42
DEFA4P12838 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC12.44□□□□□ -0.42
DEFA4P12838 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
DEFA4P12838 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
DEFA4P12838 LINC00628-201ENST00000628516 1289 ntBASIC12.44□□□□□ -0.42
DEFA4P12838 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
DEFA4P12838 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms