Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.86□□□□□ -0.03
CDH1P12830 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDH1P12830 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH1P12830 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH1P12830 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.86□□□□□ -0.03
CDH1P12830 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH1P12830 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH1P12830 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDH1P12830 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.86□□□□□ -0.03
CDH1P12830 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDH1P12830 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CDH1P12830 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
CDH1P12830 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDH1P12830 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.86□□□□□ -0.03
CDH1P12830 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.86□□□□□ -0.03
CDH1P12830 RPL13AP25-201ENST00000484130 612 ntBASIC14.86□□□□□ -0.03
CDH1P12830 GAPDHP40-201ENST00000505218 1006 ntBASIC14.86□□□□□ -0.03
CDH1P12830 AC026410.3-201ENST00000514280 936 ntBASIC14.86□□□□□ -0.03
CDH1P12830 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.86□□□□□ -0.03
CDH1P12830 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.86□□□□□ -0.03
CDH1P12830 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.86□□□□□ -0.03
CDH1P12830 AC140912.1-201ENST00000577171 1054 ntBASIC14.86□□□□□ -0.03
CDH1P12830 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.86□□□□□ -0.03
CDH1P12830 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.86□□□□□ -0.03
CDH1P12830 AC008494.3-201ENST00000606615 944 ntBASIC14.86□□□□□ -0.03
CDH1P12830 AL645728.2-202ENST00000641679 227 ntBASIC14.86□□□□□ -0.03
CDH1P12830 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH1P12830 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH1P12830 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CDH1P12830 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH1P12830 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CDH1P12830 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH1P12830 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH1P12830 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
CDH1P12830 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH1P12830 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.86□□□□□ -0.03
CDH1P12830 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH1P12830 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.86□□□□□ -0.03
CDH1P12830 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.86□□□□□ -0.03
CDH1P12830 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDH1P12830 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.86□□□□□ -0.03
CDH1P12830 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.86□□□□□ -0.03
CDH1P12830 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH1P12830 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CDH1P12830 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CDH1P12830 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH1P12830 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDH1P12830 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.85□□□□□ -0.03
CDH1P12830 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.03
CDH1P12830 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.85□□□□□ -0.03
CDH1P12830 INTS4P2-202ENST00000614726 2019 ntBASIC14.85□□□□□ -0.03
CDH1P12830 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.85□□□□□ -0.03
CDH1P12830 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH1P12830 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.85□□□□□ -0.03
CDH1P12830 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.85□□□□□ -0.03
CDH1P12830 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH1P12830 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH1P12830 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.85□□□□□ -0.03
CDH1P12830 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CDH1P12830 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.85□□□□□ -0.03
CDH1P12830 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.85□□□□□ -0.03
CDH1P12830 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.85□□□□□ -0.03
CDH1P12830 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CDH1P12830 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.85□□□□□ -0.03
CDH1P12830 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.85□□□□□ -0.03
CDH1P12830 AC092552.1-201ENST00000547243 906 ntBASIC14.85□□□□□ -0.03
CDH1P12830 WASH4P-201ENST00000564273 1246 ntBASIC14.85□□□□□ -0.03
CDH1P12830 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.85□□□□□ -0.03
CDH1P12830 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.85□□□□□ -0.03
CDH1P12830 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDH1P12830 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.85□□□□□ -0.03
CDH1P12830 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
CDH1P12830 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH1P12830 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.85□□□□□ -0.03
CDH1P12830 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDH1P12830 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH1P12830 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.85□□□□□ -0.03
CDH1P12830 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDH1P12830 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CDH1P12830 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.85□□□□□ -0.03
CDH1P12830 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.85□□□□□ -0.03
CDH1P12830 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.85□□□□□ -0.03
CDH1P12830 AL137784.3-201ENST00000623858 2288 ntBASIC14.85□□□□□ -0.03
CDH1P12830 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH1P12830 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH1P12830 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.84□□□□□ -0.03
CDH1P12830 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH1P12830 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.84□□□□□ -0.03
CDH1P12830 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH1P12830 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH1P12830 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDH1P12830 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.84□□□□□ -0.03
CDH1P12830 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDH1P12830 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH1P12830 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH1P12830 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH1P12830 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH1P12830 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH1P12830 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH1P12830 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms