Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
UBL4AP11441 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBL4AP11441 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBL4AP11441 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.15□□□□□ -0.14
UBL4AP11441 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.15□□□□□ -0.14
UBL4AP11441 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.15□□□□□ -0.14
UBL4AP11441 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
UBL4AP11441 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.15□□□□□ -0.14
UBL4AP11441 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.15□□□□□ -0.14
UBL4AP11441 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
UBL4AP11441 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.15□□□□□ -0.14
UBL4AP11441 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.15□□□□□ -0.14
UBL4AP11441 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.15□□□□□ -0.14
UBL4AP11441 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBL4AP11441 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.15□□□□□ -0.15
UBL4AP11441 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.15□□□□□ -0.15
UBL4AP11441 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.15
UBL4AP11441 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBL4AP11441 AGAP7P-201ENST00000582299 2062 ntBASIC14.14□□□□□ -0.15
UBL4AP11441 AGAP14-201ENST00000624701 2060 ntBASIC14.14□□□□□ -0.15
UBL4AP11441 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBL4AP11441 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBL4AP11441 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBL4AP11441 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBL4AP11441 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBL4AP11441 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBL4AP11441 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.14□□□□□ -0.15
UBL4AP11441 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBL4AP11441 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBL4AP11441 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.14□□□□□ -0.15
UBL4AP11441 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBL4AP11441 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBL4AP11441 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
UBL4AP11441 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
UBL4AP11441 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
UBL4AP11441 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBL4AP11441 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBL4AP11441 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
UBL4AP11441 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.14□□□□□ -0.15
UBL4AP11441 TSPY16P-201ENST00000449843 468 ntBASIC14.14□□□□□ -0.15
UBL4AP11441 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
UBL4AP11441 RN7SL399P-201ENST00000471648 279 ntBASIC14.14□□□□□ -0.15
UBL4AP11441 SERBP1P5-201ENST00000510079 1181 ntBASIC14.14□□□□□ -0.15
UBL4AP11441 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.14□□□□□ -0.15
UBL4AP11441 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
UBL4AP11441 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.14□□□□□ -0.15
UBL4AP11441 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.14□□□□□ -0.15
UBL4AP11441 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBL4AP11441 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
UBL4AP11441 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.14□□□□□ -0.15
UBL4AP11441 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBL4AP11441 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.14□□□□□ -0.15
UBL4AP11441 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBL4AP11441 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
UBL4AP11441 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
UBL4AP11441 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBL4AP11441 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
UBL4AP11441 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
UBL4AP11441 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBL4AP11441 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
UBL4AP11441 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
UBL4AP11441 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
UBL4AP11441 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
UBL4AP11441 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBL4AP11441 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
UBL4AP11441 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBL4AP11441 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.13□□□□□ -0.15
UBL4AP11441 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBL4AP11441 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.13□□□□□ -0.15
UBL4AP11441 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBL4AP11441 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBL4AP11441 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
UBL4AP11441 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
UBL4AP11441 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC14.13□□□□□ -0.15
UBL4AP11441 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBL4AP11441 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBL4AP11441 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.13□□□□□ -0.15
UBL4AP11441 CICP8-201ENST00000455800 2813 ntBASIC14.13□□□□□ -0.15
UBL4AP11441 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.13□□□□□ -0.15
UBL4AP11441 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
UBL4AP11441 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
UBL4AP11441 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
UBL4AP11441 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.13□□□□□ -0.15
UBL4AP11441 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.13□□□□□ -0.15
UBL4AP11441 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBL4AP11441 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBL4AP11441 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBL4AP11441 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
UBL4AP11441 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBL4AP11441 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBL4AP11441 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBL4AP11441 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.13□□□□□ -0.15
UBL4AP11441 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.13□□□□□ -0.15
UBL4AP11441 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.13□□□□□ -0.15
UBL4AP11441 BCRP1-201ENST00000444246 691 ntBASIC14.13□□□□□ -0.15
UBL4AP11441 SPTLC1P1-201ENST00000447199 261 ntBASIC14.13□□□□□ -0.15
UBL4AP11441 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.13□□□□□ -0.15
UBL4AP11441 RPL13AP25-201ENST00000484130 612 ntBASIC14.13□□□□□ -0.15
UBL4AP11441 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
UBL4AP11441 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms