Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC13.4□□□□□ -0.26
UBCP0CG48 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.4□□□□□ -0.26
UBCP0CG48 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
UBCP0CG48 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.4□□□□□ -0.26
UBCP0CG48 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
UBCP0CG48 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
UBCP0CG48 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
UBCP0CG48 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
UBCP0CG48 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
UBCP0CG48 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
UBCP0CG48 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
UBCP0CG48 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
UBCP0CG48 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
UBCP0CG48 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.4□□□□□ -0.26
UBCP0CG48 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
UBCP0CG48 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
UBCP0CG48 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
UBCP0CG48 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.4□□□□□ -0.26
UBCP0CG48 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
UBCP0CG48 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
UBCP0CG48 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.27
UBCP0CG48 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
UBCP0CG48 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.27
UBCP0CG48 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.27
UBCP0CG48 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.27
UBCP0CG48 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.39□□□□□ -0.27
UBCP0CG48 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
UBCP0CG48 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.39□□□□□ -0.27
UBCP0CG48 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.39□□□□□ -0.27
UBCP0CG48 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.39□□□□□ -0.27
UBCP0CG48 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
UBCP0CG48 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
UBCP0CG48 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC13.39□□□□□ -0.27
UBCP0CG48 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
UBCP0CG48 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
UBCP0CG48 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.39□□□□□ -0.27
UBCP0CG48 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
UBCP0CG48 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
UBCP0CG48 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
UBCP0CG48 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
UBCP0CG48 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
UBCP0CG48 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
UBCP0CG48 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
UBCP0CG48 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
UBCP0CG48 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
UBCP0CG48 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC13.39□□□□□ -0.27
UBCP0CG48 RPL37AP1-201ENST00000412502 279 ntBASIC13.39□□□□□ -0.27
UBCP0CG48 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.39□□□□□ -0.27
UBCP0CG48 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC13.39□□□□□ -0.27
UBCP0CG48 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.39□□□□□ -0.27
UBCP0CG48 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC13.39□□□□□ -0.27
UBCP0CG48 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.39□□□□□ -0.27
UBCP0CG48 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
UBCP0CG48 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
UBCP0CG48 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.39□□□□□ -0.27
UBCP0CG48 AC010327.4-202ENST00000591484 748 ntBASIC13.39□□□□□ -0.27
UBCP0CG48 LINC01115-203ENST00000606068 577 ntBASIC13.39□□□□□ -0.27
UBCP0CG48 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.39□□□□□ -0.27
UBCP0CG48 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.39□□□□□ -0.27
UBCP0CG48 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.39□□□□□ -0.27
UBCP0CG48 AF228730.6-201ENST00000641497 218 ntBASIC13.39□□□□□ -0.27
UBCP0CG48 AC084121.3-201ENST00000641716 218 ntBASIC13.39□□□□□ -0.27
UBCP0CG48 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
UBCP0CG48 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
UBCP0CG48 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
UBCP0CG48 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.39□□□□□ -0.27
UBCP0CG48 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
UBCP0CG48 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
UBCP0CG48 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
UBCP0CG48 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
UBCP0CG48 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
UBCP0CG48 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
UBCP0CG48 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
UBCP0CG48 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
UBCP0CG48 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.39□□□□□ -0.27
UBCP0CG48 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.39□□□□□ -0.27
UBCP0CG48 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
UBCP0CG48 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.39□□□□□ -0.27
UBCP0CG48 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
UBCP0CG48 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
UBCP0CG48 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
UBCP0CG48 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
UBCP0CG48 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
UBCP0CG48 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
UBCP0CG48 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
UBCP0CG48 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
UBCP0CG48 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
UBCP0CG48 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
UBCP0CG48 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
UBCP0CG48 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
UBCP0CG48 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.38□□□□□ -0.27
UBCP0CG48 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
UBCP0CG48 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
UBCP0CG48 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC13.38□□□□□ -0.27
UBCP0CG48 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
UBCP0CG48 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
UBCP0CG48 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
UBCP0CG48 AC211486.1-202ENST00000416371 468 ntBASIC13.38□□□□□ -0.27
UBCP0CG48 BX842568.4-201ENST00000421222 227 ntBASIC13.38□□□□□ -0.27
UBCP0CG48 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms