Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 RPL28-209ENST00000560055 670 ntTSL 3 BASIC13.23□□□□□ -0.29
CSF1P09603 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CSF1P09603 IGHV3OR16-6-201ENST00000568775 360 ntBASIC13.23□□□□□ -0.29
CSF1P09603 AC026120.1-201ENST00000611536 926 ntBASIC13.23□□□□□ -0.29
CSF1P09603 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC13.23□□□□□ -0.29
CSF1P09603 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CSF1P09603 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CSF1P09603 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CSF1P09603 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.23□□□□□ -0.29
CSF1P09603 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CSF1P09603 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CSF1P09603 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
CSF1P09603 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CSF1P09603 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CSF1P09603 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
CSF1P09603 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
CSF1P09603 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CSF1P09603 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.23□□□□□ -0.29
CSF1P09603 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CSF1P09603 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CSF1P09603 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.23□□□□□ -0.29
CSF1P09603 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSF1P09603 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.22□□□□□ -0.29
CSF1P09603 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSF1P09603 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.22□□□□□ -0.29
CSF1P09603 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CSF1P09603 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.22□□□□□ -0.29
CSF1P09603 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CSF1P09603 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSF1P09603 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSF1P09603 AC018529.2-202ENST00000611482 3087 ntBASIC13.22□□□□□ -0.29
CSF1P09603 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSF1P09603 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSF1P09603 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CSF1P09603 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSF1P09603 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSF1P09603 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.22□□□□□ -0.29
CSF1P09603 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSF1P09603 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSF1P09603 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSF1P09603 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.22□□□□□ -0.29
CSF1P09603 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CSF1P09603 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSF1P09603 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.22□□□□□ -0.29
CSF1P09603 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSF1P09603 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSF1P09603 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CSF1P09603 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSF1P09603 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSF1P09603 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
CSF1P09603 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSF1P09603 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CSF1P09603 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CSF1P09603 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSF1P09603 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSF1P09603 FALEC-201ENST00000416894 566 ntTSL 3 BASIC13.22□□□□□ -0.29
CSF1P09603 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC13.22□□□□□ -0.29
CSF1P09603 AL671277.1-201ENST00000429656 993 ntBASIC13.22□□□□□ -0.29
CSF1P09603 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC13.22□□□□□ -0.29
CSF1P09603 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC13.22□□□□□ -0.29
CSF1P09603 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC13.22□□□□□ -0.29
CSF1P09603 CNN2P2-201ENST00000443536 909 ntBASIC13.22□□□□□ -0.29
CSF1P09603 CNN2P3-201ENST00000450201 906 ntBASIC13.22□□□□□ -0.29
CSF1P09603 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
CSF1P09603 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CSF1P09603 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CSF1P09603 AC093214.1-201ENST00000511688 1107 ntBASIC13.22□□□□□ -0.29
CSF1P09603 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC13.22□□□□□ -0.29
CSF1P09603 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
CSF1P09603 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CSF1P09603 CD7-202ENST00000578509 925 ntTSL 3 BASIC13.22□□□□□ -0.29
CSF1P09603 AC138761.1-201ENST00000584393 385 ntBASIC13.22□□□□□ -0.29
CSF1P09603 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC13.22□□□□□ -0.29
CSF1P09603 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CSF1P09603 AC005498.2-205ENST00000593218 784 ntBASIC13.22□□□□□ -0.29
CSF1P09603 AL136317.3-201ENST00000618497 906 ntBASIC13.22□□□□□ -0.29
CSF1P09603 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSF1P09603 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
CSF1P09603 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CSF1P09603 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSF1P09603 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
CSF1P09603 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSF1P09603 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CSF1P09603 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSF1P09603 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
CSF1P09603 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSF1P09603 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CSF1P09603 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CSF1P09603 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSF1P09603 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.22□□□□□ -0.29
CSF1P09603 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.22□□□□□ -0.29
CSF1P09603 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
CSF1P09603 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CSF1P09603 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
CSF1P09603 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
CSF1P09603 AP001267.2-201ENST00000532619 2086 ntBASIC13.22□□□□□ -0.29
CSF1P09603 AC011474.4-201ENST00000623523 2076 ntBASIC13.22□□□□□ -0.29
CSF1P09603 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.22□□□□□ -0.29
CSF1P09603 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSF1P09603 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms