Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.32■□□□□ 0.2
TUBB4AP04350 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.32■□□□□ 0.2
TUBB4AP04350 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.32■□□□□ 0.2
TUBB4AP04350 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
TUBB4AP04350 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.32■□□□□ 0.2
TUBB4AP04350 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.32■□□□□ 0.2
TUBB4AP04350 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TUBB4AP04350 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
TUBB4AP04350 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC16.32■□□□□ 0.2
TUBB4AP04350 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TUBB4AP04350 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TUBB4AP04350 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
TUBB4AP04350 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC16.32■□□□□ 0.2
TUBB4AP04350 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBB4AP04350 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBB4AP04350 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TUBB4AP04350 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC16.31■□□□□ 0.2
TUBB4AP04350 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBB4AP04350 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC16.31■□□□□ 0.2
TUBB4AP04350 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.31■□□□□ 0.2
TUBB4AP04350 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBB4AP04350 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TUBB4AP04350 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBB4AP04350 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBB4AP04350 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TUBB4AP04350 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
TUBB4AP04350 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBB4AP04350 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBB4AP04350 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.31■□□□□ 0.2
TUBB4AP04350 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBB4AP04350 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBB4AP04350 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TUBB4AP04350 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
TUBB4AP04350 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.31■□□□□ 0.2
TUBB4AP04350 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.31■□□□□ 0.2
TUBB4AP04350 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.31■□□□□ 0.2
TUBB4AP04350 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
TUBB4AP04350 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.31■□□□□ 0.2
TUBB4AP04350 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBB4AP04350 AC009078.2-202ENST00000463353 338 ntBASIC16.31■□□□□ 0.2
TUBB4AP04350 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.31■□□□□ 0.2
TUBB4AP04350 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.31■□□□□ 0.2
TUBB4AP04350 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.31■□□□□ 0.2
TUBB4AP04350 AC117500.6-201ENST00000624871 588 ntBASIC16.31■□□□□ 0.2
TUBB4AP04350 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.31■□□□□ 0.2
TUBB4AP04350 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBB4AP04350 AC020658.7-201ENST00000624274 2442 ntBASIC16.31■□□□□ 0.2
TUBB4AP04350 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
TUBB4AP04350 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
TUBB4AP04350 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC16.31■□□□□ 0.2
TUBB4AP04350 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC16.31■□□□□ 0.2
TUBB4AP04350 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC16.31■□□□□ 0.2
TUBB4AP04350 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBB4AP04350 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBB4AP04350 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TUBB4AP04350 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBB4AP04350 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TUBB4AP04350 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TUBB4AP04350 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBB4AP04350 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBB4AP04350 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC16.31■□□□□ 0.2
TUBB4AP04350 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC16.3■□□□□ 0.2
TUBB4AP04350 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC16.3■□□□□ 0.2
TUBB4AP04350 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TUBB4AP04350 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TUBB4AP04350 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
TUBB4AP04350 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TUBB4AP04350 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.3■□□□□ 0.2
TUBB4AP04350 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.3■□□□□ 0.2
TUBB4AP04350 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TUBB4AP04350 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TUBB4AP04350 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.3■□□□□ 0.2
TUBB4AP04350 AC002056.1-201ENST00000395613 760 ntBASIC16.3■□□□□ 0.2
TUBB4AP04350 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.3■□□□□ 0.2
TUBB4AP04350 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.3■□□□□ 0.2
TUBB4AP04350 AC012640.2-201ENST00000561606 901 ntBASIC16.3■□□□□ 0.2
TUBB4AP04350 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.3■□□□□ 0.2
TUBB4AP04350 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.3■□□□□ 0.2
TUBB4AP04350 ADK-205ENST00000539909 1866 ntTSL 2 BASIC16.3■□□□□ 0.2
TUBB4AP04350 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC16.3■□□□□ 0.2
TUBB4AP04350 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TUBB4AP04350 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TUBB4AP04350 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TUBB4AP04350 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TUBB4AP04350 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TUBB4AP04350 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TUBB4AP04350 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TUBB4AP04350 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TUBB4AP04350 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TUBB4AP04350 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TUBB4AP04350 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TUBB4AP04350 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC16.3■□□□□ 0.2
TUBB4AP04350 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC16.3■□□□□ 0.2
TUBB4AP04350 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TUBB4AP04350 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TUBB4AP04350 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC16.3■□□□□ 0.2
TUBB4AP04350 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TUBB4AP04350 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
TUBB4AP04350 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.29■□□□□ 0.2
TUBB4AP04350 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms